Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
pte385780
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
pte385780
Paramecium tetraurelia
8.4e-88
324.3
161
100.0
pte248830
Paramecium tetraurelia
8.2e-51
201.4
157
62.4
pte596320
Paramecium tetraurelia
8.2e-51
201.4
157
61.8
pte716210
Paramecium tetraurelia
8.2e-51
201.4
157
61.8
pte447000
Paramecium tetraurelia
1.6e-46
187.2
157
57.3
Pp3c21_350
Physcomitrella patens
1.3e-35
151.0
156
47.4
Pp3c22_2030
Physcomitrella patens
1.3e-35
151.0
156
47.4
Pp3c19_21460
Physcomitrella patens
6.3e-35
148.7
156
46.8
WBGene00006931
Caenorhabditis elegans
3.1e-34
146.4
153
43.8
pte410490
Paramecium tetraurelia
9.1e-34
144.8
157
44.6
Cre09.g414200
Chlamydomonas reinhardtii
2.0e-33
143.7
153
45.1
AA0054G00090
Aureococcus anophagefferens
3.8e-32
139.4
153
43.1
AA0267G00030
Aureococcus anophagefferens
3.8e-32
139.4
153
43.1
ENSG00000122958
Homo sapiens
3.8e-32
139.4
154
44.2
FBgn0014411
Drosophila melanogaster
5.0e-32
139.0
153
43.1
ENSG00000151502
Homo sapiens
1.5e-31
137.5
154
41.6
Ec-08_001990
Ectocarpus siliculosus
4.2e-31
136.0
153
41.8
emh366480
Emiliania huxleyi
5.6e-31
135.6
159
42.1
emh209080
Emiliania huxleyi
2.8e-30
133.3
133
46.6
Naga_100189g6
Nannochloropsis gaditana
3.6e-30
132.9
155
40.6
tps45570
Thalassiosira pseudonana
3.0e-29
129.8
149
43.0
gene7196
Fragilariopsis cylindrus
1.5e-28
127.5
159
40.3
ccr62500
Chondrus crispus
4.4e-28
125.9
154
40.9
fso173580
Fistulifera solaris
1.7e-27
124.0
168
38.7
fso183090
Fistulifera solaris
1.7e-27
124.0
168
38.7
gsu19690
Galdieria sulphuraria
1.7e-27
124.0
154
42.2
CC00G149760
Cyclotella cryptica
3.7e-27
122.9
174
37.4
SPAC4G9.13c
Schizosaccharomyces pombe
3.7e-27
122.9
155
36.8
ptri150820
Phaeodactylum tricornutum
1.8e-26
120.6
161
37.9
YJL053W
Saccharomyces cerevisiae strain S288C
1.8e-26
120.6
150
42.7
Sro2_g001510
Seminavis robusta
5.4e-26
119.0
165
38.2
sya00G89690
Synedra acus
7.0e-26
118.6
159
38.4
tho441460
Thalassiosira oceanica
7.0e-26
118.6
166
36.7
AT4G27690
Arabidopsis thaliana
1.6e-25
117.5
155
39.4
ps00G186670
Pseudo-nitzschia multiseries
2.7e-25
116.7
177
35.0
AT5G53530
Arabidopsis thaliana
5.9e-25
115.5
155
38.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing