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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G136730
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G136730
Pseudo-nitzschia multiseries
1.2e-27
122.9
53
100.0
gene2568
Fragilariopsis cylindrus
3.6e-19
94.7
51
74.5
PSNMU-V1.4_AUG-EV-PASAV3_0001320
Pseudo-nitzschia multistriata
4.1e-15
81.3
51
60.8
ps00G31530
Pseudo-nitzschia multiseries
1.6e-14
79.3
51
60.8
tho257860
Thalassiosira oceanica
1.0e-13
76.6
45
62.2
CC00G116200
Cyclotella cryptica
2.2e-13
75.5
51
51.0
gene11505
Fragilariopsis cylindrus
2.9e-13
75.1
51
54.9
tho336700
Thalassiosira oceanica
2.9e-13
75.1
45
60.0
PSNMU-V1.4_AUG-EV-PASAV3_0006630
Pseudo-nitzschia multistriata
3.6e-11
68.2
45
55.6
Sro295_g110310
Seminavis robusta
8.0e-11
67.0
51
47.1
Sro995_g229110
Seminavis robusta
1.0e-10
66.6
51
47.1
tps132520
Thalassiosira pseudonana
5.2e-10
64.3
53
47.2
Cre16.g694208
Chlamydomonas reinhardtii
1.3e-08
59.7
47
55.3
AA0004G01410
Aureococcus anophagefferens
3.7e-08
58.2
43
60.5
Sro98_g050620
Seminavis robusta
3.7e-08
58.2
52
40.4
fso106920
Fistulifera solaris
4.8e-08
57.8
52
48.1
fso193920
Fistulifera solaris
4.8e-08
57.8
52
48.1
AT3G53680
Arabidopsis thaliana
6.3e-08
57.4
46
45.7
AT5G58610
Arabidopsis thaliana
6.3e-08
57.4
46
45.7
ccr55880
Chondrus crispus
8.3e-08
57.0
49
49.0
ps00G96590
Pseudo-nitzschia multiseries
8.3e-08
57.0
51
47.1
AT1G05380
Arabidopsis thaliana
1.1e-07
56.6
48
41.7
CM18G04720
Cyanidioschyzon merolae
1.4e-07
56.2
50
42.0
Cre05.g247000
Chlamydomonas reinhardtii
1.8e-07
55.8
51
49.0
PSNMU-V1.4_AUG-EV-PASAV3_0097200
Pseudo-nitzschia multistriata
1.8e-07
55.8
49
44.9
AA0002G04180
Aureococcus anophagefferens
3.1e-07
55.1
49
49.0
AT3G14980
Arabidopsis thaliana
3.1e-07
55.1
48
41.7
Cre13.g592100
Chlamydomonas reinhardtii
3.1e-07
55.1
49
51.0
tps221230
Thalassiosira pseudonana
3.1e-07
55.1
50
44.0
ptri210750
Phaeodactylum tricornutum
4.1e-07
54.7
53
45.3
ptri232150
Phaeodactylum tricornutum
4.1e-07
54.7
46
47.8
AT2G36720
Arabidopsis thaliana
5.4e-07
54.3
46
43.5
gene14179
Fragilariopsis cylindrus
5.4e-07
54.3
46
47.8
ENSG00000160224
Homo sapiens
7.0e-07
53.9
50
46.0
sya00G111210
Synedra acus
7.0e-07
53.9
51
47.1
CC00G169430
Cyclotella cryptica
1.2e-06
53.1
53
43.4
CC00G198170
Cyclotella cryptica
1.2e-06
53.1
53
43.4
Ec-06_008460
Ectocarpus siliculosus
1.6e-06
52.8
46
45.7
Sro216_g089260
Seminavis robusta
1.6e-06
52.8
50
46.0
tho206560
Thalassiosira oceanica
1.6e-06
52.8
48
45.8
ps00G185770
Pseudo-nitzschia multiseries
2.0e-06
52.4
51
43.1
gene10211
Fragilariopsis cylindrus
3.5e-06
51.6
48
39.6
AT5G44800
Arabidopsis thaliana
4.5e-06
51.2
50
46.0
emh575390
Emiliania huxleyi
4.5e-06
51.2
56
44.6
gsu71730
Galdieria sulphuraria
4.5e-06
51.2
52
42.3
ps00G00390
Pseudo-nitzschia multiseries
4.5e-06
51.2
50
44.0
Sro925_g220870
Seminavis robusta
4.5e-06
51.2
51
45.1
ENSG00000130024
Homo sapiens
5.9e-06
50.8
49
44.9
AA0021G01150
Aureococcus anophagefferens
7.7e-06
50.4
47
40.4
PSNMU-V1.4_AUG-EV-PASAV3_0111790
Pseudo-nitzschia multistriata
7.7e-06
50.4
52
40.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (5 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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