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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ps00G111280
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ps00G111280
Pseudo-nitzschia multiseries
0.0e+00
1434.5
1248
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0123490
Pseudo-nitzschia multistriata
1.5e-35
153.7
666
35.1
tho207000
Thalassiosira oceanica
3.2e-17
92.8
153
37.9
tho24160
Thalassiosira oceanica
1.2e-16
90.9
153
37.3
tho113620
Thalassiosira oceanica
2.7e-16
89.7
150
38.7
tho269800
Thalassiosira oceanica
6.0e-16
88.6
150
39.3
tho225040
Thalassiosira oceanica
8.7e-15
84.7
153
36.6
CC00G110590
Cyclotella cryptica
1.9e-14
83.6
161
34.2
CC00G139280
Cyclotella cryptica
7.4e-14
81.6
162
34.6
tho31100
Thalassiosira oceanica
7.4e-14
81.6
147
36.1
CC00G28500
Cyclotella cryptica
9.6e-14
81.3
147
35.4
gene10479
Fragilariopsis cylindrus
9.6e-14
81.3
63
65.1
tho15640
Thalassiosira oceanica
1.3e-13
80.9
150
38.7
CC00G67280
Cyclotella cryptica
3.7e-13
79.3
163
31.9
CC00G110470
Cyclotella cryptica
8.2e-13
78.2
163
30.7
CC00G183890
Cyclotella cryptica
6.9e-12
75.1
169
33.1
tho146100
Thalassiosira oceanica
6.9e-12
75.1
146
32.9
CC00G177980
Cyclotella cryptica
1.5e-11
73.9
172
30.2
tho02320
Thalassiosira oceanica
1.3e-10
70.9
147
32.7
Sro1693_g291681
Seminavis robusta
5.1e-07
58.9
141
31.2
tho583900
Thalassiosira oceanica
6.7e-07
58.5
61
45.9
tho119280
Thalassiosira oceanica
9.7e-06
54.7
45
51.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (11 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (7 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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