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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gsu19280
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gsu19280
Galdieria sulphuraria
0.0e+00
1280.4
634
100.0
ccr156360
Chondrus crispus
1.8e-88
328.6
556
35.3
Ec-24_000110
Ectocarpus siliculosus
3.6e-57
224.6
560
29.5
emh724720
Emiliania huxleyi
3.8e-51
204.5
352
34.7
fso108830
Fistulifera solaris
6.5e-51
203.8
600
29.8
fso50470
Fistulifera solaris
7.2e-50
200.3
594
29.0
CM08G01740
Cyanidioschyzon merolae
1.4e-48
196.1
444
30.9
gene12596
Fragilariopsis cylindrus
5.4e-45
184.1
593
26.6
sya00G41010
Synedra acus
5.4e-45
184.1
591
26.9
ptri97390
Phaeodactylum tricornutum
5.9e-44
180.6
448
31.5
CC00G111870
Cyclotella cryptica
6.6e-43
177.2
367
33.8
CC00G124660
Cyclotella cryptica
6.6e-43
177.2
367
33.8
CC00G124680
Cyclotella cryptica
6.6e-43
177.2
367
33.8
CC00G197950
Cyclotella cryptica
6.6e-43
177.2
367
33.8
gene7260
Fragilariopsis cylindrus
4.2e-42
174.5
475
28.6
Sro48_g028410
Seminavis robusta
1.6e-41
172.6
586
26.8
sya00G269980
Synedra acus
1.6e-41
172.6
430
29.5
ps00G185410
Pseudo-nitzschia multiseries
1.4e-40
169.5
396
31.8
Sro1301_g260840
Seminavis robusta
4.0e-40
167.9
434
29.7
Sro1854_g301900
Seminavis robusta
5.2e-40
167.5
435
29.7
CC00G33820
Cyclotella cryptica
6.8e-40
167.2
258
39.5
pte195630
Paramecium tetraurelia
8.9e-40
166.8
353
31.4
PSNMU-V1.4_AUG-EV-PASAV3_0065830
Pseudo-nitzschia multistriata
1.5e-39
166.0
459
29.2
fso187870
Fistulifera solaris
2.6e-39
165.2
360
31.7
gene12604
Fragilariopsis cylindrus
7.5e-39
163.7
610
25.6
fso114550
Fistulifera solaris
1.7e-38
162.5
362
31.8
tho258620
Thalassiosira oceanica
1.7e-38
162.5
253
37.2
gene7259
Fragilariopsis cylindrus
2.5e-26
122.1
490
26.1
AT1G71696
Arabidopsis thaliana
3.1e-16
88.6
312
23.7
Pp3c16_14030
Physcomitrella patens
2.3e-11
72.4
216
24.5
WBGene00019074
Caenorhabditis elegans
1.1e-08
63.5
270
21.9
CC00G101530
Cyclotella cryptica
1.4e-08
63.2
355
22.5
WBGene00008521
Caenorhabditis elegans
5.2e-08
61.2
277
22.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing