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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene18768
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene18768
Fragilariopsis cylindrus
0.0e+00
1262.7
661
100.0
ps00G189530
Pseudo-nitzschia multiseries
0.0e+00
1102.0
657
85.5
PSNMU-V1.4_AUG-EV-PASAV3_0018670
Pseudo-nitzschia multistriata
0.0e+00
1100.1
660
85.9
Sro812_g206010
Seminavis robusta
7.8e-271
934.5
663
74.2
ptri02140
Phaeodactylum tricornutum
1.8e-267
923.3
649
74.1
fso35690
Fistulifera solaris
3.3e-261
902.5
661
69.1
fso21160
Fistulifera solaris
3.7e-260
899.0
661
69.0
sya00G82420
Synedra acus
3.4e-258
892.5
662
69.6
tps116240
Thalassiosira pseudonana
2.9e-249
862.8
661
67.5
CC00G144600
Cyclotella cryptica
5.5e-248
858.6
666
67.0
tho36720
Thalassiosira oceanica
1.0e-241
837.8
666
64.1
Ec-12_001560
Ectocarpus siliculosus
5.0e-193
676.0
663
53.7
Naga_100036g29
Nannochloropsis gaditana
6.1e-191
669.1
659
53.6
emh577310
Emiliania huxleyi
4.6e-178
626.3
652
52.1
AA0054G00180
Aureococcus anophagefferens
2.1e-175
617.5
664
52.9
gene10021
Fragilariopsis cylindrus
3.8e-164
580.1
661
54.9
ccr104800
Chondrus crispus
7.6e-157
555.8
674
45.8
CM01G00610
Cyanidioschyzon merolae
6.6e-153
542.7
662
47.4
gsu95730
Galdieria sulphuraria
2.2e-148
527.7
670
42.5
Pp3c12_22440
Physcomitrella patens
2.7e-146
520.8
656
46.6
Pp3c4_810
Physcomitrella patens
1.4e-142
508.4
656
45.6
Pp3c19_15000
Physcomitrella patens
4.0e-142
506.9
658
44.7
Naga_100006g89
Nannochloropsis gaditana
1.1e-139
498.8
676
41.3
Cre12.g514850
Chlamydomonas reinhardtii
1.9e-139
498.0
671
43.2
Cre09.g386750
Chlamydomonas reinhardtii
9.3e-139
495.7
670
42.7
CC00G86080
Cyclotella cryptica
2.1e-138
494.6
676
42.0
CC00G100720
Cyclotella cryptica
2.1e-138
494.6
676
42.0
AT5G52640
Arabidopsis thaliana
7.9e-138
492.7
678
42.9
AT5G56000
Arabidopsis thaliana
1.5e-136
488.4
676
42.9
AT5G56010
Arabidopsis thaliana
5.7e-136
486.5
671
41.6
pte491270
Paramecium tetraurelia
1.3e-135
485.3
679
41.1
tps171030
Thalassiosira pseudonana
2.8e-135
484.2
671
40.5
fso58590
Fistulifera solaris
6.2e-135
483.0
672
40.9
ptri00320
Phaeodactylum tricornutum
8.2e-135
482.6
677
40.8
AT3G07770
Arabidopsis thaliana
1.1e-134
482.3
661
42.4
AT2G04030
Arabidopsis thaliana
5.3e-134
479.9
661
43.9
AT4G24190
Arabidopsis thaliana
5.3e-134
479.9
706
40.1
Sro1899_g304180
Seminavis robusta
5.3e-134
479.9
664
40.8
Pp3c15_12515
Physcomitrella patens
6.9e-134
479.6
669
43.8
Pp3c15_12510
Physcomitrella patens
6.9e-134
479.6
669
43.8
Ec-10_000550
Ectocarpus siliculosus
9.0e-134
479.2
674
40.5
Pp3c14_3360
Physcomitrella patens
9.0e-134
479.2
686
42.4
AA0028G00840
Aureococcus anophagefferens
2.0e-133
478.0
676
40.1
Ec-18_001040
Ectocarpus siliculosus
2.0e-133
478.0
672
40.8
ENSG00000166598
Homo sapiens
3.4e-133
477.2
665
41.7
AA0005G01430
Aureococcus anophagefferens
5.8e-133
476.5
674
39.6
Pp3c15_4270
Physcomitrella patens
5.8e-133
476.5
671
43.4
Pp3c9_6690
Physcomitrella patens
1.0e-132
475.7
674
43.2
Pp3c9_6640
Physcomitrella patens
1.0e-132
475.7
674
43.2
tho19880
Thalassiosira oceanica
1.7e-132
474.9
673
40.3
AT5G56030
Arabidopsis thaliana
8.4e-132
472.6
705
40.0
Pp3c15_6622
Physcomitrella patens
8.4e-132
472.6
671
43.1
Pp3c15_6620
Physcomitrella patens
8.4e-132
472.6
671
43.1
ps00G36300
Pseudo-nitzschia multiseries
8.4e-132
472.6
676
40.5
FBgn0001233
Drosophila melanogaster
1.4e-131
471.9
685
39.3
gene6600
Fragilariopsis cylindrus
1.4e-131
471.9
680
40.0
pte242920
Paramecium tetraurelia
2.5e-131
471.1
669
40.2
pte645840
Paramecium tetraurelia
1.6e-130
468.4
671
39.9
gsu28050
Galdieria sulphuraria
2.7e-130
467.6
679
41.1
ENSG00000096384
Homo sapiens
4.6e-130
466.8
688
39.2
CM17G02240
Cyanidioschyzon merolae
6.1e-130
466.5
676
41.9
gsu38710
Galdieria sulphuraria
3.9e-129
463.8
670
39.4
WBGene00011480
Caenorhabditis elegans
1.5e-128
461.8
675
40.3
emh533460
Emiliania huxleyi
1.9e-128
461.5
678
39.4
emh398220
Emiliania huxleyi
1.9e-128
461.5
678
39.4
emh391720
Emiliania huxleyi
1.9e-128
461.5
678
39.4
emh233000
Emiliania huxleyi
1.9e-128
461.5
678
39.4
Pp3c8_6510
Physcomitrella patens
9.7e-128
459.1
696
38.8
WBGene00000915
Caenorhabditis elegans
2.4e-126
454.5
676
40.1
Cre02.g080650
Chlamydomonas reinhardtii
6.9e-126
453.0
711
39.4
ccr72100
Chondrus crispus
1.5e-125
451.8
697
39.7
ENSG00000080824
Homo sapiens
7.7e-125
449.5
687
39.9
pte89400
Paramecium tetraurelia
1.7e-124
448.4
692
37.1
YMR186W
Saccharomyces cerevisiae strain S288C
2.2e-124
448.0
679
39.3
FBgn0039562
Drosophila melanogaster
3.8e-124
447.2
680
39.7
pte627930
Paramecium tetraurelia
6.5e-124
446.4
629
40.5
YPL240C
Saccharomyces cerevisiae strain S288C
3.2e-123
444.1
683
39.1
AA0006G05270
Aureococcus anophagefferens
4.2e-123
443.7
697
38.2
SPAC926.04c
Schizosaccharomyces pombe
4.6e-122
440.3
681
38.8
Naga_100015g31
Nannochloropsis gaditana
1.8e-118
428.3
694
37.5
pte108370
Paramecium tetraurelia
4.1e-118
427.2
684
36.5
fso145000
Fistulifera solaris
7.2e-115
416.4
604
39.4
pte22270
Paramecium tetraurelia
7.2e-115
416.4
755
33.8
CC00G165280
Cyclotella cryptica
3.0e-113
411.0
687
37.4
pte23150
Paramecium tetraurelia
8.8e-113
409.5
675
36.7
tps154830
Thalassiosira pseudonana
5.7e-112
406.8
685
37.7
fso151230
Fistulifera solaris
3.7e-111
404.1
701
35.8
pte320350
Paramecium tetraurelia
8.2e-111
402.9
755
33.2
ps00G49440
Pseudo-nitzschia multiseries
7.7e-109
396.4
704
36.9
fso191780
Fistulifera solaris
1.1e-107
392.5
701
35.2
Sro323_g117320
Seminavis robusta
4.2e-107
390.6
707
35.5
ccr170720
Chondrus crispus
1.0e-105
386.0
734
35.7
gene7034
Fragilariopsis cylindrus
1.0e-105
386.0
724
34.5
ptri11180
Phaeodactylum tricornutum
4.0e-105
384.0
712
33.8
sya00G73920
Synedra acus
4.8e-103
377.1
693
34.5
pte534190
Paramecium tetraurelia
4.0e-97
357.5
566
37.5
Pp3s58_301
Physcomitrella patens
1.2e-93
345.9
653
32.8
sya00G194800
Synedra acus
2.4e-86
321.6
646
33.9
emh659210
Emiliania huxleyi
5.9e-85
317.0
767
30.6
Ec-01_002460
Ectocarpus siliculosus
4.7e-82
307.4
674
31.9
Naga_100225g4
Nannochloropsis gaditana
1.8e-81
305.4
667
30.6
pte454090
Paramecium tetraurelia
4.0e-81
304.3
622
31.4
FBgn0026761
Drosophila melanogaster
2.0e-80
302.0
651
31.2
ptri196190
Phaeodactylum tricornutum
1.7e-79
298.9
633
31.1
gene12594
Fragilariopsis cylindrus
1.4e-78
295.8
633
33.6
ps00G42200
Pseudo-nitzschia multiseries
4.1e-78
294.3
656
32.0
fso53330
Fistulifera solaris
1.6e-77
292.4
669
31.4
ENSG00000126602
Homo sapiens
3.5e-77
291.2
636
28.5
tps58430
Thalassiosira pseudonana
7.8e-77
290.0
705
30.5
pte477620
Paramecium tetraurelia
1.7e-76
288.9
366
44.3
fso152770
Fistulifera solaris
2.3e-76
288.5
670
30.9
PSNMU-V1.4_AUG-EV-PASAV3_0063670
Pseudo-nitzschia multistriata
1.5e-75
285.8
658
31.6
pte18050
Paramecium tetraurelia
2.5e-75
285.0
471
36.3
emh720100
Emiliania huxleyi
4.3e-75
284.3
669
30.9
pte422390
Paramecium tetraurelia
7.3e-75
283.5
622
31.0
WBGene00020110
Caenorhabditis elegans
9.5e-75
283.1
664
30.6
sya00G122550
Synedra acus
9.5e-75
283.1
663
31.2
Sro30_g019920
Seminavis robusta
4.4e-72
274.2
683
31.3
pte13670
Paramecium tetraurelia
9.8e-64
246.5
403
35.7
Sro1994_g309990
Seminavis robusta
2.9e-63
245.0
328
39.9
tho285500
Thalassiosira oceanica
2.7e-53
211.8
568
28.3
CC00G185890
Cyclotella cryptica
3.4e-48
194.9
574
27.7
sya00G260160
Synedra acus
8.4e-39
163.7
174
52.3
Pp3s58_270
Physcomitrella patens
5.1e-36
154.5
324
29.3
Sro1994_g309970
Seminavis robusta
1.7e-31
139.4
122
58.2
pte477600
Paramecium tetraurelia
1.8e-28
129.4
220
34.1
AA0016G00890
Aureococcus anophagefferens
4.0e-25
118.2
360
28.1
sya00G169230
Synedra acus
4.0e-25
118.2
316
28.2
tho405700
Thalassiosira oceanica
2.2e-23
112.5
159
40.3
ccr62760
Chondrus crispus
9.3e-22
107.1
231
33.8
ccr173960
Chondrus crispus
9.3e-22
107.1
231
33.8
ccr163640
Chondrus crispus
1.2e-21
106.7
231
33.8
emh494740
Emiliania huxleyi
2.8e-18
95.5
116
40.5
CC00G185880
Cyclotella cryptica
8.2e-18
94.0
95
49.5
pte13650
Paramecium tetraurelia
6.9e-17
90.9
192
29.7
Sro699_g189380
Seminavis robusta
4.5e-16
88.2
94
45.7
AA0138G00030
Aureococcus anophagefferens
1.6e-13
79.7
90
43.3
ccr102780
Chondrus crispus
7.4e-11
70.9
136
31.6
Pp3c1_39580
Physcomitrella patens
3.4e-08
62.0
102
39.2
tho563740
Thalassiosira oceanica
4.5e-08
61.6
32
84.4
ccr169820
Chondrus crispus
5.5e-06
54.7
121
37.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (8 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (17 genes)
Seminavis robusta (7 genes)
Synedra acus (6 genes)
Physcomitrella patens (15 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing