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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso43770
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso43770
Fistulifera solaris
1.5e-254
879.8
474
100.0
fso64760
Fistulifera solaris
3.9e-250
865.1
474
98.1
Sro70_g039030
Seminavis robusta
2.4e-151
537.0
448
63.8
ptri72160
Phaeodactylum tricornutum
2.5e-148
526.9
406
65.5
sya00G196410
Synedra acus
3.3e-132
473.4
390
62.6
ps00G65070
Pseudo-nitzschia multiseries
6.9e-130
465.7
351
65.2
gene18213
Fragilariopsis cylindrus
3.8e-128
459.9
332
66.6
fso73640
Fistulifera solaris
5.5e-119
429.5
468
51.9
fso199510
Fistulifera solaris
9.3e-119
428.7
462
51.7
ptri69840
Phaeodactylum tricornutum
8.2e-107
389.0
490
46.3
CC00G149660
Cyclotella cryptica
1.5e-105
384.8
351
56.7
tps193950
Thalassiosira pseudonana
5.9e-97
356.3
274
63.5
CC00G122160
Cyclotella cryptica
4.2e-95
350.1
383
52.0
tps142420
Thalassiosira pseudonana
8.0e-94
345.9
274
61.3
Sro695_g188680
Seminavis robusta
1.1e-87
325.5
330
53.0
fso77080
Fistulifera solaris
1.5e-76
288.5
376
39.4
ps00G33510
Pseudo-nitzschia multiseries
1.5e-76
288.5
282
46.1
sya00G161050
Synedra acus
1.5e-76
288.5
282
46.5
ptri130290
Phaeodactylum tricornutum
1.1e-74
282.3
375
37.9
fso77050
Fistulifera solaris
2.4e-74
281.2
377
41.1
fso191720
Fistulifera solaris
3.1e-74
280.8
377
41.1
Sro968_g226070
Seminavis robusta
4.1e-74
280.4
371
39.9
gene16313
Fragilariopsis cylindrus
1.6e-73
278.5
282
44.7
Sro99_g050950
Seminavis robusta
4.5e-73
276.9
280
45.0
fso160310
Fistulifera solaris
6.6e-72
273.1
372
38.2
tho217020
Thalassiosira oceanica
1.8e-69
265.0
370
40.3
tps130000
Thalassiosira pseudonana
5.2e-69
263.5
275
45.5
sya00G00440
Synedra acus
1.1e-53
212.6
205
51.2
tho328140
Thalassiosira oceanica
2.5e-47
191.4
419
32.7
Sro9_g007140
Seminavis robusta
3.2e-42
174.5
144
55.6
FBgn0031816
Drosophila melanogaster
3.2e-34
147.9
277
31.4
ENSG00000163743
Homo sapiens
1.2e-33
146.0
261
30.3
CM13G01410
Cyanidioschyzon merolae
1.6e-33
145.6
280
34.3
CC00G69060
Cyclotella cryptica
3.3e-31
137.9
257
32.7
AT3G62970
Arabidopsis thaliana
1.4e-29
132.5
273
35.2
AT1G18910
Arabidopsis thaliana
1.2e-28
129.4
276
31.5
Cre17.g718300
Chlamydomonas reinhardtii
5.8e-28
127.1
274
34.7
AT1G74770
Arabidopsis thaliana
1.3e-27
125.9
377
27.1
ccr65580
Chondrus crispus
1.1e-26
122.9
293
28.3
SPAC2F3.16
Schizosaccharomyces pombe
3.5e-25
117.9
283
29.3
fso155640
Fistulifera solaris
4.6e-25
117.5
280
27.9
AT3G18290
Arabidopsis thaliana
6.0e-25
117.1
279
28.0
CC00G86210
Cyclotella cryptica
7.9e-25
116.7
279
27.2
Ec-26_004520
Ectocarpus siliculosus
7.9e-25
116.7
304
30.9
Pp3c25_14501
Physcomitrella patens
1.3e-24
115.9
372
30.6
Pp3c25_14500
Physcomitrella patens
1.3e-24
115.9
372
30.6
ccr161060
Chondrus crispus
3.0e-24
114.8
326
27.6
Pp3c2_31820
Physcomitrella patens
8.7e-24
113.2
274
33.9
Pp3c10_4820
Physcomitrella patens
1.1e-23
112.8
277
30.7
Pp3c11_6970
Physcomitrella patens
1.1e-23
112.8
274
31.0
Pp3c6_1960
Physcomitrella patens
1.5e-23
112.5
374
29.4
Cre05.g248550
Chlamydomonas reinhardtii
9.6e-23
109.8
214
38.8
Naga_100090g9
Nannochloropsis gaditana
1.3e-22
109.4
280
26.4
Pp3c14_5600
Physcomitrella patens
2.8e-22
108.2
367
28.1
Pp3c1_6070
Physcomitrella patens
2.8e-22
108.2
274
33.6
gsu76240
Galdieria sulphuraria
4.0e-21
104.4
383
25.6
pte243060
Paramecium tetraurelia
4.5e-20
100.9
282
30.1
AT5G22920
Arabidopsis thaliana
2.9e-19
98.2
256
32.0
pte760660
Paramecium tetraurelia
3.2e-18
94.7
281
33.8
AT5G25560
Arabidopsis thaliana
5.5e-18
94.0
244
30.7
Sro9_g007130
Seminavis robusta
2.3e-16
88.6
43
83.7
pte443830
Paramecium tetraurelia
8.7e-16
86.7
277
30.7
CC00G85450
Cyclotella cryptica
6.9e-13
77.0
60
53.3
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
4.2e-10
67.8
87
40.2
ccr143140
Chondrus crispus
4.3e-07
57.8
185
29.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (9 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing