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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso39730
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso39730
Fistulifera solaris
8.8e-188
657.5
336
100.0
fso109660
Fistulifera solaris
4.5e-184
645.2
336
98.5
Sro1911_g304940
Seminavis robusta
7.8e-136
485.0
327
75.8
sya00G82200
Synedra acus
5.2e-132
472.2
337
73.0
CC00G57490
Cyclotella cryptica
1.2e-131
471.1
336
73.8
gene16824
Fragilariopsis cylindrus
2.6e-131
469.9
320
73.4
ptri02420
Phaeodactylum tricornutum
7.5e-131
468.4
342
70.5
PSNMU-V1.4_AUG-EV-PASAV3_0072690
Pseudo-nitzschia multistriata
4.9e-130
465.7
325
73.5
ps00G31960
Pseudo-nitzschia multiseries
1.2e-128
461.1
323
72.8
tps53170
Thalassiosira pseudonana
7.8e-128
458.4
334
71.9
tho193440
Thalassiosira oceanica
5.1e-127
455.7
333
72.7
emh585310
Emiliania huxleyi
8.9e-124
444.9
324
70.4
Pp3c1_7380
Physcomitrella patens
3.9e-103
376.3
313
61.3
Pp3c11_3740
Physcomitrella patens
1.6e-101
370.9
313
60.7
Pp3c12_8120
Physcomitrella patens
1.1e-100
368.2
330
59.1
Naga_100855g2
Nannochloropsis gaditana
1.8e-100
367.5
320
61.2
Pp3c4_20940
Physcomitrella patens
3.4e-99
363.2
333
58.0
AT3G15020
Arabidopsis thaliana
1.4e-97
357.8
322
58.7
Ec-10_006200
Ectocarpus siliculosus
2.4e-97
357.1
325
59.1
Cre12.g483950
Chlamydomonas reinhardtii
3.2e-97
356.7
332
56.6
AT1G53240
Arabidopsis thaliana
7.1e-97
355.5
332
56.9
FBgn0262559
Drosophila melanogaster
3.5e-96
353.2
314
58.0
ENSG00000146701
Homo sapiens
3.0e-95
350.1
329
57.1
Pp3c17_6520
Physcomitrella patens
2.5e-94
347.1
322
59.3
Pp3c14_9020
Physcomitrella patens
5.6e-94
345.9
335
57.6
AT3G47520
Arabidopsis thaliana
7.4e-94
345.5
320
60.3
AT2G22780
Arabidopsis thaliana
3.7e-93
343.2
334
55.7
Cre10.g423250
Chlamydomonas reinhardtii
3.7e-93
343.2
335
57.0
AA0029G00460
Aureococcus anophagefferens
4.0e-92
339.7
333
56.8
Cre03.g194850
Chlamydomonas reinhardtii
3.8e-90
333.2
334
55.7
WBGene00003162
Caenorhabditis elegans
2.7e-88
327.0
325
55.4
YKL085W
Saccharomyces cerevisiae strain S288C
6.3e-85
315.8
333
53.5
Sro1489_g277010
Seminavis robusta
9.0e-84
312.0
326
57.1
Pp3c8_19590
Physcomitrella patens
2.6e-83
310.5
274
60.2
SPCC306.08c
Schizosaccharomyces pombe
8.5e-82
305.4
332
52.7
AT5G09660
Arabidopsis thaliana
5.5e-81
302.8
262
61.8
FBgn0036328
Drosophila melanogaster
2.3e-79
297.4
314
51.6
FBgn0036327
Drosophila melanogaster
4.1e-76
286.6
314
47.1
emh707040
Emiliania huxleyi
1.5e-70
268.1
320
47.2
YDL078C
Saccharomyces cerevisiae strain S288C
6.7e-63
242.7
260
50.8
YOL126C
Saccharomyces cerevisiae strain S288C
4.2e-49
196.8
373
39.7
emh758070
Emiliania huxleyi
5.5e-49
196.4
319
39.5
tho551260
Thalassiosira oceanica
4.9e-21
103.6
67
70.1
sya00G24630
Synedra acus
3.2e-20
100.9
296
31.8
sya00G102650
Synedra acus
1.3e-18
95.5
313
28.8
sya00G81340
Synedra acus
4.9e-13
77.0
237
28.7
Sro805_g204970
Seminavis robusta
1.2e-11
72.4
219
29.7
SPAC186.08c
Schizosaccharomyces pombe
1.3e-10
68.9
190
28.4
CM03G01890
Cyanidioschyzon merolae
1.7e-10
68.6
327
27.5
CC00G206520
Cyclotella cryptica
2.3e-10
68.2
219
27.4
CM01G01450
Cyanidioschyzon merolae
3.0e-10
67.8
327
27.2
CM09G03060
Cyanidioschyzon merolae
3.0e-10
67.8
327
27.2
CM11G00060
Cyanidioschyzon merolae
3.0e-10
67.8
327
27.2
Pp3c21_11360
Physcomitrella patens
1.9e-09
65.1
328
22.6
Pp3c22_12920
Physcomitrella patens
4.3e-09
63.9
323
23.5
ENSG00000166796
Homo sapiens
5.6e-09
63.5
328
23.2
CM10G00020
Cyanidioschyzon merolae
6.2e-08
60.1
238
27.3
ENSG00000134333
Homo sapiens
3.1e-07
57.8
331
23.0
tps189980
Thalassiosira pseudonana
3.1e-07
57.8
193
29.5
FBgn0001258
Drosophila melanogaster
2.0e-06
55.1
261
21.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (5 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing