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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso155420
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso155420
Fistulifera solaris
0.0e+00
1666.7
832
100.0
fso150120
Fistulifera solaris
0.0e+00
1469.1
838
88.9
ptri181790
Phaeodactylum tricornutum
1.8e-178
627.9
811
45.0
Sro654_g182120
Seminavis robusta
2.4e-130
468.0
1024
33.5
PSNMU-V1.4_AUG-EV-PASAV3_0007610
Pseudo-nitzschia multistriata
3.9e-128
460.7
950
35.9
ps00G52170
Pseudo-nitzschia multiseries
9.0e-125
449.5
858
35.8
gene1205
Fragilariopsis cylindrus
3.7e-118
427.6
584
43.5
sya00G12820
Synedra acus
1.1e-93
346.3
840
30.8
CC00G91040
Cyclotella cryptica
1.5e-71
272.7
815
29.6
tho241420
Thalassiosira oceanica
2.1e-65
252.3
759
28.9
gene6120
Fragilariopsis cylindrus
1.8e-53
212.6
173
63.0
FBgn0260397
Drosophila melanogaster
4.0e-48
194.9
612
27.6
ptri132410
Phaeodactylum tricornutum
1.3e-46
189.9
622
28.0
fso191050
Fistulifera solaris
2.0e-44
182.6
650
26.9
fso71680
Fistulifera solaris
2.7e-44
182.2
650
27.2
ENSG00000004487
Homo sapiens
3.5e-44
181.8
609
27.4
ccr191780
Chondrus crispus
6.0e-44
181.0
624
27.1
gsu121740
Galdieria sulphuraria
3.0e-43
178.7
597
27.3
AT1G62830
Arabidopsis thaliana
2.1e-41
172.6
641
25.7
Cre07.g318651
Chlamydomonas reinhardtii
2.8e-41
172.2
631
27.1
AT3G10390
Arabidopsis thaliana
6.2e-41
171.0
587
27.3
AT3G13682
Arabidopsis thaliana
1.4e-40
169.9
593
26.3
Sro1581_g283780
Seminavis robusta
1.8e-40
169.5
667
26.4
Pp3c14_17210
Physcomitrella patens
2.3e-40
169.1
595
25.0
AT4G16310
Arabidopsis thaliana
5.2e-40
167.9
616
26.8
Pp3c10_16040
Physcomitrella patens
6.8e-40
167.5
595
25.7
CM15G01040
Cyanidioschyzon merolae
6.6e-35
151.0
607
25.2
Pp3c1_6380
Physcomitrella patens
1.5e-34
149.8
610
25.9
Pp3c1_6385
Physcomitrella patens
1.5e-34
149.8
610
25.9
AT1G65840
Arabidopsis thaliana
7.5e-31
137.5
591
24.7
Pp3c1_1170
Physcomitrella patens
1.7e-30
136.3
218
35.8
AT3G59050
Arabidopsis thaliana
2.9e-30
135.6
598
25.6
PSNMU-V1.4_AUG-EV-PASAV3_0059180
Pseudo-nitzschia multistriata
2.4e-29
132.5
608
23.8
Pp3c9_8130
Physcomitrella patens
2.7e-28
129.0
640
24.7
Pp3c9_8100
Physcomitrella patens
2.7e-28
129.0
640
24.7
Cre10.g447767
Chlamydomonas reinhardtii
3.5e-28
128.6
613
27.1
emh539350
Emiliania huxleyi
6.0e-28
127.9
222
34.2
AT2G43020
Arabidopsis thaliana
3.0e-27
125.6
589
26.3
sya00G238230
Synedra acus
5.1e-27
124.8
274
33.2
WBGene00000137
Caenorhabditis elegans
8.6e-27
124.0
600
23.7
Sro1832_g300430
Seminavis robusta
1.9e-26
122.9
217
34.6
ccr81740
Chondrus crispus
2.5e-26
122.5
602
27.2
Pp3c15_18820
Physcomitrella patens
1.2e-25
120.2
624
23.9
Ec-24_001850
Ectocarpus siliculosus
1.1e-24
117.1
217
34.6
ENSG00000088826
Homo sapiens
2.6e-23
112.5
649
25.1
ps00G88080
Pseudo-nitzschia multiseries
2.4e-21
105.9
212
31.6
AT4G29720
Arabidopsis thaliana
4.2e-21
105.1
631
23.1
WBGene00005010
Caenorhabditis elegans
9.2e-21
104.0
606
24.8
sya00G108400
Synedra acus
1.6e-20
103.2
203
33.0
Sro738_g195300
Seminavis robusta
2.1e-20
102.8
238
29.0
PSNMU-V1.4_AUG-EV-PASAV3_0032800
Pseudo-nitzschia multistriata
2.7e-20
102.4
280
28.9
tho100460
Thalassiosira oceanica
2.7e-20
102.4
229
31.9
emh532160
Emiliania huxleyi
2.5e-18
95.9
162
34.6
gene8256
Fragilariopsis cylindrus
4.3e-18
95.1
240
32.1
Sro982_g227750
Seminavis robusta
4.3e-18
95.1
252
26.6
Sro2365_g325020
Seminavis robusta
5.6e-18
94.7
246
26.8
tho162980
Thalassiosira oceanica
7.3e-18
94.4
232
28.9
Pp3s34_620
Physcomitrella patens
9.6e-18
94.0
191
35.1
FBgn0037606
Drosophila melanogaster
1.2e-17
93.6
224
30.4
ENSG00000148832
Homo sapiens
2.1e-17
92.8
229
29.3
Sro619_g176360
Seminavis robusta
4.7e-17
91.7
213
30.0
tho285040
Thalassiosira oceanica
1.4e-16
90.1
239
26.4
Sro1456_g274230
Seminavis robusta
2.4e-16
89.4
216
31.9
gene6119
Fragilariopsis cylindrus
3.1e-16
89.0
107
47.7
tho443760
Thalassiosira oceanica
4.0e-16
88.6
231
28.6
FBgn0035943
Drosophila melanogaster
9.0e-16
87.4
225
30.2
AA0005G05200
Aureococcus anophagefferens
1.5e-15
86.7
216
32.4
Sro111_g055430
Seminavis robusta
2.0e-15
86.3
259
27.8
gene15596
Fragilariopsis cylindrus
9.9e-15
84.0
258
28.3
Pp3c2_35433
Physcomitrella patens
9.9e-15
84.0
131
34.4
WBGene00011615
Caenorhabditis elegans
1.7e-14
83.2
607
22.7
tho198900
Thalassiosira oceanica
2.2e-14
82.8
248
27.4
tho251140
Thalassiosira oceanica
2.9e-14
82.4
228
28.5
tho458580
Thalassiosira oceanica
2.9e-14
82.4
223
29.6
FBgn0036750
Drosophila melanogaster
4.9e-14
81.6
225
28.0
gsu72430
Galdieria sulphuraria
4.9e-14
81.6
600
22.2
tho412380
Thalassiosira oceanica
4.9e-14
81.6
278
26.3
PSNMU-V1.4_AUG-EV-PASAV3_0102820
Pseudo-nitzschia multistriata
6.4e-14
81.3
656
24.2
tho16540
Thalassiosira oceanica
8.4e-14
80.9
277
25.6
tho216080
Thalassiosira oceanica
1.1e-13
80.5
243
28.8
Sro213_g088370
Seminavis robusta
1.4e-13
80.1
263
25.5
fso136320
Fistulifera solaris
2.4e-13
79.3
228
28.1
ps00G24680
Pseudo-nitzschia multiseries
3.2e-13
79.0
238
27.7
AT5G13700
Arabidopsis thaliana
4.2e-13
78.6
208
29.8
emh163540
Emiliania huxleyi
3.5e-12
75.5
107
39.3
AA0014G00960
Aureococcus anophagefferens
7.8e-12
74.3
203
30.0
FBgn0002036
Drosophila melanogaster
7.8e-12
74.3
219
26.0
PSNMU-V1.4_AUG-EV-PASAV3_0079500
Pseudo-nitzschia multistriata
3.0e-11
72.4
221
28.1
FBgn0036749
Drosophila melanogaster
3.9e-11
72.0
227
27.8
gene6071
Fragilariopsis cylindrus
8.7e-11
70.9
612
22.2
emh163520
Emiliania huxleyi
1.9e-10
69.7
119
34.5
ptri58240
Phaeodactylum tricornutum
1.9e-10
69.7
230
28.7
tho135260
Thalassiosira oceanica
1.9e-10
69.7
245
28.6
FBgn0033584
Drosophila melanogaster
3.3e-10
68.9
238
26.5
Sro436_g142640
Seminavis robusta
3.3e-10
68.9
615
24.7
WBGene00000139
Caenorhabditis elegans
4.3e-10
68.6
230
25.7
gene18307
Fragilariopsis cylindrus
9.6e-10
67.4
224
25.4
tho88340
Thalassiosira oceanica
1.3e-09
67.0
231
25.1
WBGene00016061
Caenorhabditis elegans
2.8e-09
65.9
260
24.2
PSNMU-V1.4_AUG-EV-PASAV3_0030440
Pseudo-nitzschia multistriata
4.8e-09
65.1
220
25.5
sya00G238240
Synedra acus
1.1e-08
63.9
61
52.5
ENSG00000189221
Homo sapiens
2.6e-07
59.3
88
44.3
ENSG00000069535
Homo sapiens
3.4e-07
58.9
91
40.7
Ec-04_005780
Ectocarpus siliculosus
4.5e-07
58.5
92
39.1
Pp3c2_35420
Physcomitrella patens
7.6e-07
57.8
129
31.0
tps157120
Thalassiosira pseudonana
7.6e-07
57.8
38
71.1
Sro1282_g259000
Seminavis robusta
1.3e-06
57.0
184
25.0
AA0006G03670
Aureococcus anophagefferens
2.2e-06
56.2
98
33.7
Naga_100375g5
Nannochloropsis gaditana
3.8e-06
55.5
125
27.2
emh191940
Emiliania huxleyi
6.4e-06
54.7
102
35.3
Cre10.g456650
Chlamydomonas reinhardtii
8.4e-06
54.3
82
43.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (13 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (7 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (7 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (12 genes)
Synedra acus (4 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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