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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
emh469860
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
emh469860
Emiliania huxleyi
1.1e-73
277.7
204
100.0
emh95570
Emiliania huxleyi
4.7e-27
122.9
66
98.5
AA0012G02530
Aureococcus anophagefferens
3.6e-11
70.1
135
48.1
fso58970
Fistulifera solaris
5.8e-09
62.8
45
66.7
fso144630
Fistulifera solaris
5.8e-09
62.8
45
66.7
ptri205220
Phaeodactylum tricornutum
5.8e-09
62.8
45
66.7
sya00G21000
Synedra acus
1.3e-08
61.6
44
65.9
sya00G246040
Synedra acus
1.3e-08
61.6
44
65.9
SPBC2D10.12
Schizosaccharomyces pombe
1.7e-08
61.2
45
64.4
AT5G38470
Arabidopsis thaliana
2.2e-08
60.8
144
31.2
gene18200
Fragilariopsis cylindrus
2.9e-08
60.5
45
64.4
AT3G02540
Arabidopsis thaliana
4.9e-08
59.7
135
32.6
AT5G16090
Arabidopsis thaliana
4.9e-08
59.7
204
25.5
PSNMU-V1.4_AUG-EV-PASAV3_0047090
Pseudo-nitzschia multistriata
4.9e-08
59.7
43
67.4
ps00G20760
Pseudo-nitzschia multiseries
6.4e-08
59.3
42
69.0
tps176860
Thalassiosira pseudonana
6.4e-08
59.3
133
31.6
Sro1843_g301140
Seminavis robusta
8.4e-08
58.9
44
63.6
Sro219_g090420
Seminavis robusta
8.4e-08
58.9
44
63.6
tho183380
Thalassiosira oceanica
1.1e-07
58.5
44
61.4
CC00G197600
Cyclotella cryptica
1.9e-07
57.8
44
61.4
FBgn0039147
Drosophila melanogaster
2.4e-07
57.4
43
65.1
Pp3c10_8490
Physcomitrella patens
4.2e-07
56.6
135
31.1
AT1G79650
Arabidopsis thaliana
7.1e-07
55.8
136
31.6
Pp3c18_16750
Physcomitrella patens
7.1e-07
55.8
208
39.9
AT1G16190
Arabidopsis thaliana
9.2e-07
55.5
135
30.4
emh549190
Emiliania huxleyi
1.6e-06
54.7
215
33.0
Cre08.g366400
Chlamydomonas reinhardtii
2.7e-06
53.9
136
55.9
Naga_100054g12
Nannochloropsis gaditana
2.7e-06
53.9
44
56.8
YEL037C
Saccharomyces cerevisiae strain S288C
7.8e-06
52.4
44
54.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing