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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
emh452110
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
emh452110
Emiliania huxleyi
2.8e-158
559.7
385
100.0
emh156550
Emiliania huxleyi
3.0e-123
443.4
370
70.3
Pp3c2_30010
Physcomitrella patens
1.6e-52
208.4
212
52.8
Pp3c1_6880
Physcomitrella patens
2.1e-52
208.0
212
52.8
Pp3c7_25430
Physcomitrella patens
2.1e-52
208.0
184
57.6
Pp3c11_6020
Physcomitrella patens
1.0e-51
205.7
212
52.4
Cre01.g052300
Chlamydomonas reinhardtii
5.2e-51
203.4
185
56.8
AT5G22220
Arabidopsis thaliana
1.7e-49
198.4
200
53.0
ccr54040
Chondrus crispus
8.3e-49
196.1
187
55.6
AT1G47870
Arabidopsis thaliana
5.9e-47
189.9
190
52.1
Ec-21_005690
Ectocarpus siliculosus
1.5e-45
185.3
183
53.6
ENSG00000205250
Homo sapiens
1.5e-45
185.3
193
54.4
ENSG00000133740
Homo sapiens
4.0e-43
177.2
188
51.6
gsu24500
Galdieria sulphuraria
2.6e-42
174.5
228
44.3
ENSG00000007968
Homo sapiens
6.4e-41
169.9
201
47.8
Naga_100046g12
Nannochloropsis gaditana
3.2e-40
167.5
195
51.8
ENSG00000112242
Homo sapiens
9.2e-40
166.0
180
49.4
Sro2696_g334910
Seminavis robusta
1.9e-37
158.3
235
41.7
AT2G36010
Arabidopsis thaliana
3.3e-37
157.5
176
50.0
AA0005G04260
Aureococcus anophagefferens
8.0e-36
152.9
165
53.3
fso108800
Fistulifera solaris
4.0e-35
150.6
222
40.1
fso50510
Fistulifera solaris
2.6e-34
147.9
222
40.1
gene7408
Fragilariopsis cylindrus
4.4e-34
147.1
252
36.5
sya00G02640
Synedra acus
1.7e-33
145.2
217
41.0
ENSG00000169016
Homo sapiens
4.9e-33
143.7
185
42.2
ENSG00000101412
Homo sapiens
3.5e-31
137.5
194
42.8
ptri90380
Phaeodactylum tricornutum
5.0e-30
133.7
245
35.9
PSNMU-V1.4_AUG-EV-PASAV3_0119170
Pseudo-nitzschia multistriata
1.2e-28
129.0
251
36.3
ps00G152300
Pseudo-nitzschia multiseries
8.1e-28
126.3
153
45.8
pte387820
Paramecium tetraurelia
1.8e-27
125.2
241
34.9
FBgn0011766
Drosophila melanogaster
2.3e-27
124.8
265
35.8
pte323260
Paramecium tetraurelia
4.0e-27
124.0
241
34.9
sya00G205920
Synedra acus
4.4e-26
120.6
243
35.0
pte375490
Paramecium tetraurelia
2.4e-24
114.8
206
35.9
pte338620
Paramecium tetraurelia
7.1e-24
113.2
214
37.4
CC00G116100
Cyclotella cryptica
3.5e-23
110.9
246
34.6
CM20G00670
Cyanidioschyzon merolae
3.3e-21
104.4
277
30.0
FBgn0024371
Drosophila melanogaster
1.4e-19
99.0
180
37.2
WBGene00001161
Caenorhabditis elegans
6.8e-19
96.7
193
35.8
ptri229690
Phaeodactylum tricornutum
1.2e-18
95.9
107
45.8
WBGene00001162
Caenorhabditis elegans
2.9e-17
91.3
157
36.3
tps186270
Thalassiosira pseudonana
5.4e-16
87.0
104
51.0
Sro1799_g298340
Seminavis robusta
1.3e-14
82.4
186
33.9
gsu51740
Galdieria sulphuraria
7.3e-13
76.6
204
27.5
gsu51760
Galdieria sulphuraria
7.3e-13
76.6
204
27.5
AT5G14960
Arabidopsis thaliana
1.1e-11
72.8
107
35.5
AT3G01330
Arabidopsis thaliana
3.4e-10
67.8
92
39.1
AT3G48160
Arabidopsis thaliana
1.7e-09
65.5
80
41.2
gene9683
Fragilariopsis cylindrus
2.9e-09
64.7
68
44.1
Pp3c22_10160
Physcomitrella patens
4.9e-09
63.9
66
47.0
fso146010
Fistulifera solaris
1.4e-08
62.4
67
43.3
PSNMU-V1.4_AUG-EV-PASAV3_0059450
Pseudo-nitzschia multistriata
1.4e-08
62.4
68
42.6
Pp3c21_13480
Physcomitrella patens
3.2e-08
61.2
109
33.9
CM20G04330
Cyanidioschyzon merolae
5.4e-08
60.5
115
30.4
ps00G192590
Pseudo-nitzschia multiseries
5.4e-08
60.5
104
35.6
fso57480
Fistulifera solaris
1.6e-07
58.9
96
36.5
pte765590
Paramecium tetraurelia
2.1e-07
58.5
66
42.4
Sro1798_g298290
Seminavis robusta
2.1e-07
58.5
67
40.3
ptri43450
Phaeodactylum tricornutum
2.7e-07
58.2
68
39.7
pte743700
Paramecium tetraurelia
3.5e-07
57.8
111
30.6
WBGene00009899
Caenorhabditis elegans
4.6e-07
57.4
102
36.3
ENSG00000129173
Homo sapiens
4.6e-07
57.4
75
38.7
sya00G139740
Synedra acus
1.0e-06
56.2
66
42.4
ENSG00000165891
Homo sapiens
1.3e-06
55.8
108
33.3
CC00G184720
Cyclotella cryptica
2.3e-06
55.1
74
35.1
tps124770
Thalassiosira pseudonana
2.3e-06
55.1
98
32.7
gsu134980
Galdieria sulphuraria
3.9e-06
54.3
205
27.3
gsu20670
Galdieria sulphuraria
8.7e-06
53.1
92
33.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing