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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YDR435C
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YDR435C
Saccharomyces cerevisiae strain S288C
5.6e-187
654.8
329
100.0
ENSG00000205629
Homo sapiens
3.2e-25
117.5
330
30.0
WBGene00007137
Caenorhabditis elegans
2.7e-24
114.4
333
29.4
SPBP8B7.08c
Schizosaccharomyces pombe
3.0e-23
110.9
324
26.9
gsu45120
Galdieria sulphuraria
2.8e-21
104.4
338
28.1
gsu45140
Galdieria sulphuraria
2.8e-21
104.4
338
28.1
AT1G02100
Arabidopsis thaliana
1.1e-20
102.4
279
29.7
YOL141W
Saccharomyces cerevisiae strain S288C
8.4e-18
92.8
342
25.7
fso194750
Fistulifera solaris
9.3e-17
89.4
266
27.4
FBgn0028507
Drosophila melanogaster
1.3e-15
85.5
260
25.4
pte326520
Paramecium tetraurelia
2.3e-15
84.7
333
23.1
emh446740
Emiliania huxleyi
6.7e-15
83.2
258
27.9
Naga_100059g31
Nannochloropsis gaditana
2.4e-12
74.7
175
31.4
ptri33690
Phaeodactylum tricornutum
5.0e-10
67.0
317
24.6
fso107710
Fistulifera solaris
2.5e-09
64.7
132
29.5
Cre04.g229350
Chlamydomonas reinhardtii
5.5e-09
63.5
164
28.7
sya00G23360
Synedra acus
3.6e-08
60.8
298
23.2
PSNMU-V1.4_AUG-EV-PASAV3_0027150
Pseudo-nitzschia multistriata
3.3e-06
54.3
397
20.9
gene20440
Fragilariopsis cylindrus
9.7e-06
52.8
225
22.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (0 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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