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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00007556
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00007556
Caenorhabditis elegans
0.0e+00
1225.7
604
100.0
ENSG00000258529
Homo sapiens
1.6e-107
391.7
570
39.5
ENSG00000086848
Homo sapiens
1.4e-106
388.7
577
39.2
FBgn0039293
Drosophila melanogaster
2.0e-102
374.8
559
38.3
SPAC1834.05
Schizosaccharomyces pombe
1.5e-81
305.4
572
37.2
gsu129920
Galdieria sulphuraria
3.6e-75
284.3
568
32.9
Pp3c6_16240
Physcomitrella patens
6.2e-75
283.5
621
33.2
AT1G16900
Arabidopsis thaliana
5.4e-71
270.4
588
32.1
Ec-17_001510
Ectocarpus siliculosus
1.4e-66
255.8
647
30.6
tps115140
Thalassiosira pseudonana
4.0e-66
254.2
588
32.5
CM17G01620
Cyanidioschyzon merolae
5.8e-65
250.4
549
32.2
emh700160
Emiliania huxleyi
3.6e-59
231.1
570
31.1
Sro72_g039900
Seminavis robusta
6.2e-59
230.3
565
31.2
tho226900
Thalassiosira oceanica
6.4e-56
220.3
657
29.2
YNL219C
Saccharomyces cerevisiae strain S288C
7.1e-55
216.9
538
30.7
fso172840
Fistulifera solaris
6.0e-54
213.8
564
31.4
sya00G46360
Synedra acus
1.4e-50
202.6
575
27.8
fso60800
Fistulifera solaris
4.0e-50
201.1
534
30.1
ptri180030
Phaeodactylum tricornutum
6.9e-50
200.3
549
31.0
ps00G73630
Pseudo-nitzschia multiseries
2.7e-46
188.3
569
28.1
Naga_100083g12
Nannochloropsis gaditana
7.9e-46
186.8
581
28.4
PSNMU-V1.4_AUG-EV-PASAV3_0035210
Pseudo-nitzschia multistriata
7.4e-44
180.3
599
27.0
gene10542
Fragilariopsis cylindrus
2.0e-41
172.2
642
28.0
CC00G91140
Cyclotella cryptica
2.5e-39
165.2
393
30.0
CC00G169130
Cyclotella cryptica
2.3e-13
79.0
168
29.8
Pp3c10_23630
Physcomitrella patens
4.7e-06
54.7
355
24.8
Pp3c10_23620
Physcomitrella patens
4.7e-06
54.7
355
24.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing