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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00000293
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00000293
Caenorhabditis elegans
2.1e-155
549.7
271
100.0
ENSG00000077549
Homo sapiens
9.1e-103
374.8
268
66.4
FBgn0011570
Drosophila melanogaster
2.9e-101
369.8
270
65.2
AA0012G01630
Aureococcus anophagefferens
1.7e-69
264.2
274
50.0
SPAC631.01c
Schizosaccharomyces pombe
4.2e-63
243.0
267
47.6
Pp3c1_32040
Physcomitrella patens
9.3e-63
241.9
247
52.6
AT1G71790
Arabidopsis thaliana
1.3e-61
238.0
245
49.4
Ec-23_003050
Ectocarpus siliculosus
4.9e-56
219.5
280
41.1
YIL034C
Saccharomyces cerevisiae strain S288C
1.1e-52
208.4
290
43.4
emh381240
Emiliania huxleyi
2.5e-52
207.2
227
49.8
pte334340
Paramecium tetraurelia
2.1e-46
187.6
267
39.3
pte278350
Paramecium tetraurelia
1.8e-45
184.5
260
40.4
tho55200
Thalassiosira oceanica
2.1e-43
177.6
268
36.6
Naga_100004g104
Nannochloropsis gaditana
4.2e-39
163.3
278
38.1
ptri222280
Phaeodactylum tricornutum
9.4e-23
109.0
250
28.0
sya00G06570
Synedra acus
6.3e-19
96.3
249
28.5
CC00G32810
Cyclotella cryptica
1.1e-15
85.5
240
28.8
tho657660
Thalassiosira oceanica
1.9e-07
58.2
69
39.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (0 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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