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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro9_g007140
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro9_g007140
Seminavis robusta
1.3e-137
490.3
229
100.0
Sro70_g039030
Seminavis robusta
9.0e-51
201.8
165
59.4
sya00G196410
Synedra acus
3.4e-50
199.9
144
60.4
ptri72160
Phaeodactylum tricornutum
1.6e-47
191.0
148
56.8
ps00G65070
Pseudo-nitzschia multiseries
3.9e-46
186.4
150
56.0
CC00G149660
Cyclotella cryptica
8.7e-46
185.3
146
56.2
gene18213
Fragilariopsis cylindrus
2.5e-45
183.7
144
56.2
tps142420
Thalassiosira pseudonana
1.3e-44
181.4
146
55.5
Sro695_g188680
Seminavis robusta
5.3e-43
176.0
152
53.9
ptri69840
Phaeodactylum tricornutum
6.9e-43
175.6
146
54.1
CC00G122160
Cyclotella cryptica
5.8e-42
172.6
151
51.0
fso43770
Fistulifera solaris
5.8e-42
172.6
144
55.6
tps193950
Thalassiosira pseudonana
9.9e-42
171.8
141
53.9
fso64760
Fistulifera solaris
1.7e-41
171.0
173
50.3
fso199510
Fistulifera solaris
2.2e-41
170.6
156
51.9
tps130000
Thalassiosira pseudonana
2.2e-41
170.6
138
52.2
ps00G33510
Pseudo-nitzschia multiseries
2.9e-41
170.2
144
49.3
sya00G161050
Synedra acus
2.9e-41
170.2
141
49.6
gene16313
Fragilariopsis cylindrus
6.4e-41
169.1
141
50.4
Sro968_g226070
Seminavis robusta
2.4e-40
167.2
141
48.9
Sro99_g050950
Seminavis robusta
2.4e-40
167.2
141
48.9
fso73640
Fistulifera solaris
7.1e-40
165.6
156
50.0
ptri130290
Phaeodactylum tricornutum
1.6e-39
164.5
141
48.9
fso77080
Fistulifera solaris
1.1e-37
158.3
141
48.2
CC00G69060
Cyclotella cryptica
1.6e-36
154.5
106
57.5
fso160310
Fistulifera solaris
2.0e-34
147.5
141
46.1
tho217020
Thalassiosira oceanica
3.4e-34
146.7
138
47.8
fso77050
Fistulifera solaris
7.6e-34
145.6
141
44.7
fso191720
Fistulifera solaris
1.0e-33
145.2
141
44.7
FBgn0031816
Drosophila melanogaster
2.1e-31
137.5
154
44.2
ENSG00000163743
Homo sapiens
2.9e-25
117.1
146
35.6
tho328140
Thalassiosira oceanica
3.8e-25
116.7
110
49.1
sya00G00440
Synedra acus
5.0e-25
116.3
94
56.4
tps146910
Thalassiosira pseudonana
1.2e-18
95.1
154
33.8
CC00G86210
Cyclotella cryptica
5.9e-18
92.8
152
35.5
AT3G18290
Arabidopsis thaliana
1.9e-16
87.8
146
34.2
CM13G01410
Cyanidioschyzon merolae
3.6e-15
83.6
143
30.8
Cre05.g248550
Chlamydomonas reinhardtii
4.6e-15
83.2
154
31.8
tho87860
Thalassiosira oceanica
1.8e-14
81.3
153
30.7
SPAC2F3.16
Schizosaccharomyces pombe
2.3e-14
80.9
143
28.7
Cre17.g718300
Chlamydomonas reinhardtii
3.9e-14
80.1
157
28.7
Naga_100090g9
Nannochloropsis gaditana
8.8e-14
79.0
147
32.0
Pp3c10_4820
Physcomitrella patens
9.7e-13
75.5
159
27.7
gsu76240
Galdieria sulphuraria
1.1e-11
72.0
150
28.7
AT5G22920
Arabidopsis thaliana
1.4e-11
71.6
157
28.7
pte443830
Paramecium tetraurelia
3.1e-11
70.5
157
29.9
pte243060
Paramecium tetraurelia
5.3e-11
69.7
206
24.3
Pp3c11_6970
Physcomitrella patens
9.1e-11
68.9
162
26.5
Pp3c6_1960
Physcomitrella patens
1.5e-10
68.2
149
28.2
Pp3c2_31820
Physcomitrella patens
5.9e-10
66.2
147
25.2
Pp3c1_6070
Physcomitrella patens
1.3e-09
65.1
157
24.2
Sro33_g021250
Seminavis robusta
1.3e-09
65.1
60
53.3
Pp3c25_14501
Physcomitrella patens
1.7e-09
64.7
145
26.9
Pp3c25_14500
Physcomitrella patens
1.7e-09
64.7
145
26.9
Sro1634_g287460
Seminavis robusta
3.8e-09
63.5
46
71.7
Sro136_g063990
Seminavis robusta
1.9e-08
61.2
45
64.4
Sro1188_g250590
Seminavis robusta
7.2e-08
59.3
51
60.8
Sro2289_g322110
Seminavis robusta
7.2e-08
59.3
51
60.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (10 genes)
Synedra acus (3 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing