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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro73_g040540
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro73_g040540
Seminavis robusta
3.8e-238
825.1
407
100.0
Sro13_g010210
Seminavis robusta
3.5e-29
131.0
320
32.2
fso157060
Fistulifera solaris
1.2e-26
122.5
329
29.8
fso188670
Fistulifera solaris
2.1e-26
121.7
329
29.2
fso156280
Fistulifera solaris
1.2e-24
115.9
270
31.9
fso87180
Fistulifera solaris
1.3e-23
112.5
271
31.4
Sro670_g184740
Seminavis robusta
2.7e-18
94.7
359
26.7
Sro670_g184730
Seminavis robusta
1.0e-17
92.8
337
26.4
Sro1530_g280110
Seminavis robusta
1.5e-16
89.0
338
26.0
sya00G143420
Synedra acus
4.5e-13
77.4
403
22.3
tps226020
Thalassiosira pseudonana
2.3e-12
75.1
259
25.9
gene11584
Fragilariopsis cylindrus
2.9e-12
74.7
316
24.4
tho368220
Thalassiosira oceanica
1.5e-11
72.4
286
25.5
sya00G20270
Synedra acus
1.9e-11
72.0
319
24.5
tps226040
Thalassiosira pseudonana
2.8e-07
58.2
66
43.9
CC00G201460
Cyclotella cryptica
3.1e-06
54.7
197
22.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (5 genes)
Synedra acus (2 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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