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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro2_g001820
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro2_g001820
Seminavis robusta
0.0e+00
2365.5
1253
100.0
ptri196930
Phaeodactylum tricornutum
2.2e-279
963.8
1277
44.2
gene16554
Fragilariopsis cylindrus
1.4e-238
828.2
1088
45.8
ps00G53220
Pseudo-nitzschia multiseries
1.5e-200
701.8
1210
40.7
CC00G104590
Cyclotella cryptica
9.3e-198
692.6
1362
36.7
PSNMU-V1.4_AUG-EV-PASAV3_0089050
Pseudo-nitzschia multistriata
5.3e-177
623.6
964
41.4
fso154340
Fistulifera solaris
1.5e-176
622.1
1102
37.1
fso101080
Fistulifera solaris
4.3e-171
604.0
1150
35.2
sya00G250500
Synedra acus
3.1e-161
571.2
1089
35.4
ENSG00000164654
Homo sapiens
3.2e-57
225.7
638
28.7
tps36580
Thalassiosira pseudonana
5.1e-55
218.4
279
43.7
FBgn0031399
Drosophila melanogaster
1.8e-47
193.4
466
28.8
tho590640
Thalassiosira oceanica
2.9e-42
176.0
122
62.3
YBL104C
Saccharomyces cerevisiae strain S288C
1.1e-41
174.1
601
25.5
SPAC12G12.01c
Schizosaccharomyces pombe
2.5e-41
172.9
594
26.4
emh273490
Emiliania huxleyi
1.3e-18
97.4
160
33.8
emh127370
Emiliania huxleyi
1.9e-17
93.6
294
25.5
pte663160
Paramecium tetraurelia
7.2e-09
65.1
135
26.7
CC00G176260
Cyclotella cryptica
7.5e-06
55.1
35
57.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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