Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro2261_g321150
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro2261_g321150
Seminavis robusta
8.9e-287
986.9
473
100.0
ps00G57480
Pseudo-nitzschia multiseries
3.6e-171
602.8
465
60.2
fso49480
Fistulifera solaris
6.4e-168
592.0
466
62.4
fso27200
Fistulifera solaris
4.1e-167
589.3
469
61.8
ptri47850
Phaeodactylum tricornutum
1.1e-159
564.7
467
59.7
CC00G95020
Cyclotella cryptica
4.3e-140
499.6
525
49.3
CC00G133790
Cyclotella cryptica
2.7e-134
480.3
457
52.1
sya00G64440
Synedra acus
1.9e-132
474.2
435
54.9
PSNMU-V1.4_AUG-EV-PASAV3_0062170
Pseudo-nitzschia multistriata
1.2e-129
464.9
438
53.0
sya00G172000
Synedra acus
2.4e-114
414.1
449
49.0
tps73080
Thalassiosira pseudonana
1.8e-109
397.9
471
45.6
CC00G79370
Cyclotella cryptica
8.7e-109
395.6
476
45.0
gene3451
Fragilariopsis cylindrus
1.5e-108
394.8
275
66.9
tps212020
Thalassiosira pseudonana
6.5e-96
352.8
277
59.6
gene7251
Fragilariopsis cylindrus
3.9e-93
343.6
276
59.8
Cre13.g565600
Chlamydomonas reinhardtii
9.1e-74
279.3
439
38.3
ptri205380
Phaeodactylum tricornutum
2.5e-71
271.2
434
38.5
AA0001G01220
Aureococcus anophagefferens
3.6e-70
267.3
423
37.6
sya00G228240
Synedra acus
3.2e-58
227.6
364
36.5
tho21620
Thalassiosira oceanica
2.3e-40
168.3
465
30.8
emh29350
Emiliania huxleyi
4.4e-28
127.5
194
39.7
pte157800
Paramecium tetraurelia
1.4e-13
79.3
348
26.7
pte428270
Paramecium tetraurelia
6.9e-13
77.0
346
24.9
pte501940
Paramecium tetraurelia
9.0e-13
76.6
176
28.4
pte674870
Paramecium tetraurelia
2.2e-11
72.0
195
27.7
pte577730
Paramecium tetraurelia
1.9e-10
68.9
145
30.3
pte418310
Paramecium tetraurelia
2.4e-10
68.6
195
26.2
Ec-11_006110
Ectocarpus siliculosus
5.5e-10
67.4
205
27.8
pte779620
Paramecium tetraurelia
9.3e-10
66.6
188
23.9
WBGene00018995
Caenorhabditis elegans
1.2e-09
66.2
197
24.9
pte218490
Paramecium tetraurelia
1.6e-09
65.9
196
26.0
ENSG00000135049
Homo sapiens
2.7e-09
65.1
311
22.8
pte288460
Paramecium tetraurelia
7.9e-09
63.5
190
25.8
emh712530
Emiliania huxleyi
1.0e-08
63.2
125
33.6
ENSG00000166748
Homo sapiens
1.8e-08
62.4
133
29.3
FBgn0265726
Drosophila melanogaster
3.0e-08
61.6
124
33.9
pte81420
Paramecium tetraurelia
3.0e-08
61.6
135
31.9
pte436800
Paramecium tetraurelia
3.0e-08
61.6
139
30.9
AA0020G01370
Aureococcus anophagefferens
3.9e-08
61.2
271
23.6
pte408580
Paramecium tetraurelia
3.9e-08
61.2
140
27.9
pte224070
Paramecium tetraurelia
6.7e-08
60.5
338
21.9
Ec-00_007300
Ectocarpus siliculosus
8.7e-08
60.1
179
29.1
pte168410
Paramecium tetraurelia
1.1e-07
59.7
195
23.6
pte449010
Paramecium tetraurelia
1.5e-07
59.3
140
27.1
ENSG00000084693
Homo sapiens
1.9e-07
58.9
195
24.6
AA0024G00200
Aureococcus anophagefferens
3.3e-07
58.2
128
29.7
Cre13.g572850
Chlamydomonas reinhardtii
5.6e-07
57.4
139
29.5
ENSG00000146856
Homo sapiens
1.3e-06
56.2
128
28.9
Cre12.g528100
Chlamydomonas reinhardtii
2.1e-06
55.5
129
29.5
pte267230
Paramecium tetraurelia
2.1e-06
55.5
157
27.4
pte722760
Paramecium tetraurelia
2.8e-06
55.1
162
26.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (17 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing