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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro1829_g300220
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro1829_g300220
Seminavis robusta
1.6e-304
1046.2
598
100.0
Sro2116_g315180
Seminavis robusta
2.5e-129
464.2
485
59.8
PSNMU-V1.4_AUG-EV-PASAV3_0087330
Pseudo-nitzschia multistriata
1.5e-118
428.3
580
43.8
fso90630
Fistulifera solaris
2.6e-118
427.6
597
46.9
fso146470
Fistulifera solaris
1.0e-117
425.6
597
47.6
gene18251
Fragilariopsis cylindrus
8.5e-101
369.4
459
47.1
ps00G100950
Pseudo-nitzschia multiseries
1.2e-99
365.5
472
47.2
Sro1771_g296600
Seminavis robusta
2.9e-85
317.8
639
39.7
ps00G40430
Pseudo-nitzschia multiseries
2.7e-83
311.2
465
41.5
ptri27850
Phaeodactylum tricornutum
4.7e-83
310.5
472
41.7
CC00G97390
Cyclotella cryptica
1.4e-79
298.9
617
36.1
gene13391
Fragilariopsis cylindrus
9.1e-79
296.2
457
42.0
ps00G104160
Pseudo-nitzschia multiseries
2.2e-77
291.6
524
36.8
gene14559
Fragilariopsis cylindrus
8.8e-74
279.6
287
52.3
tps127230
Thalassiosira pseudonana
7.0e-71
270.0
458
39.5
Sro175_g077140
Seminavis robusta
8.6e-69
263.1
505
38.0
tho395540
Thalassiosira oceanica
1.3e-64
249.2
434
37.3
gene20636
Fragilariopsis cylindrus
2.5e-60
235.0
533
36.4
PSNMU-V1.4_AUG-EV-PASAV3_0036180
Pseudo-nitzschia multistriata
3.0e-45
184.9
338
37.3
fso189820
Fistulifera solaris
1.3e-40
169.5
288
39.9
AA0028G00400
Aureococcus anophagefferens
1.8e-34
149.1
653
25.3
YNL101W
Saccharomyces cerevisiae strain S288C
3.6e-27
124.8
379
30.9
YKL146W
Saccharomyces cerevisiae strain S288C
6.2e-27
124.0
352
29.0
fso167620
Fistulifera solaris
9.3e-23
110.2
166
46.4
SPAC3H1.09c
Schizosaccharomyces pombe
1.0e-21
106.7
343
28.0
Ec-17_003820
Ectocarpus siliculosus
4.3e-20
101.3
461
24.9
Naga_100256g2
Nannochloropsis gaditana
1.2e-17
93.2
348
26.7
Ec-08_006480
Ectocarpus siliculosus
4.5e-17
91.3
354
23.7
PSNMU-V1.4_AUG-EV-PASAV3_0005880
Pseudo-nitzschia multistriata
7.6e-17
90.5
130
38.5
pte463440
Paramecium tetraurelia
8.4e-16
87.0
375
25.6
FBgn0030817
Drosophila melanogaster
3.2e-15
85.1
365
25.8
pte446740
Paramecium tetraurelia
3.5e-14
81.6
362
22.4
FBgn0032036
Drosophila melanogaster
4.6e-14
81.3
328
23.5
AT3G11900
Arabidopsis thaliana
1.3e-13
79.7
349
24.1
AA0222G00010
Aureococcus anophagefferens
1.8e-13
79.3
452
23.5
Pp3c15_890
Physcomitrella patens
3.9e-13
78.2
430
24.4
pte342890
Paramecium tetraurelia
3.9e-13
78.2
359
22.6
AT5G65990
Arabidopsis thaliana
9.6e-12
73.6
354
26.0
FBgn0030816
Drosophila melanogaster
1.6e-11
72.8
334
25.4
tps54360
Thalassiosira pseudonana
3.7e-11
71.6
348
23.0
WBGene00020837
Caenorhabditis elegans
1.8e-10
69.3
336
23.5
AT4G38250
Arabidopsis thaliana
1.5e-09
66.2
348
24.4
CC00G31290
Cyclotella cryptica
2.2e-08
62.4
345
22.3
AT2G42005
Arabidopsis thaliana
1.4e-07
59.7
312
24.0
pte548740
Paramecium tetraurelia
2.5e-07
58.9
309
24.9
CM07G01030
Cyanidioschyzon merolae
4.2e-07
58.2
250
24.4
gene15627
Fragilariopsis cylindrus
7.1e-07
57.4
437
23.8
ENSG00000123643
Homo sapiens
7.1e-07
57.4
213
26.8
Sro511_g157480
Seminavis robusta
1.6e-06
56.2
341
21.1
Cre03.g168550
Chlamydomonas reinhardtii
6.0e-06
54.3
333
23.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (5 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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