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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
SPAC1006.05c
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
SPAC1006.05c
Schizosaccharomyces pombe
3.6e-217
755.4
397
100.0
YGL038C
Saccharomyces cerevisiae strain S288C
7.0e-51
203.0
402
32.6
YJR075W
Saccharomyces cerevisiae strain S288C
5.5e-48
193.4
284
36.6
gsu13330
Galdieria sulphuraria
1.8e-30
135.2
270
31.9
gsu103210
Galdieria sulphuraria
8.6e-25
116.3
204
34.3
Cre02.g116150
Chlamydomonas reinhardtii
2.1e-23
111.7
327
27.5
Cre12.g522650
Chlamydomonas reinhardtii
1.4e-22
109.0
264
29.9
CM20G06360
Cyanidioschyzon merolae
4.0e-22
107.5
251
29.1
tps39940
Thalassiosira pseudonana
8.9e-22
106.3
270
27.4
AA0001G02270
Aureococcus anophagefferens
1.4e-14
82.4
159
30.2
ptri102620
Phaeodactylum tricornutum
1.3e-09
65.9
183
29.5
fso146580
Fistulifera solaris
1.7e-09
65.5
164
27.4
Sro80_g043010
Seminavis robusta
3.0e-09
64.7
164
28.7
fso65330
Fistulifera solaris
3.9e-09
64.3
181
27.6
Sro1117_g242940
Seminavis robusta
3.9e-09
64.3
199
27.6
CC00G64320
Cyclotella cryptica
5.1e-09
63.9
164
27.4
ptri215050
Phaeodactylum tricornutum
5.1e-09
63.9
164
29.3
fso64970
Fistulifera solaris
8.6e-09
63.2
181
27.6
tps223760
Thalassiosira pseudonana
8.6e-09
63.2
194
25.8
fso146590
Fistulifera solaris
1.1e-08
62.8
164
27.4
Sro250_g098900
Seminavis robusta
1.5e-08
62.4
165
26.1
fso90720
Fistulifera solaris
1.9e-08
62.0
164
27.4
fso146570
Fistulifera solaris
5.6e-08
60.5
226
24.8
CC00G06770
Cyclotella cryptica
7.3e-08
60.1
198
27.8
fso90730
Fistulifera solaris
2.1e-07
58.5
164
25.6
fso05680
Fistulifera solaris
3.6e-07
57.8
192
26.0
ptri102900
Phaeodactylum tricornutum
3.6e-07
57.8
174
25.9
tps68470
Thalassiosira pseudonana
3.6e-07
57.8
159
27.7
fso169380
Fistulifera solaris
6.2e-07
57.0
213
27.2
gene6575
Fragilariopsis cylindrus
1.1e-06
56.2
164
27.4
tps224510
Thalassiosira pseudonana
1.1e-06
56.2
151
23.8
fso55090
Fistulifera solaris
1.8e-06
55.5
205
25.9
ptri219640
Phaeodactylum tricornutum
3.1e-06
54.7
106
31.1
emh352640
Emiliania huxleyi
6.8e-06
53.5
150
27.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing