Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c24_6830
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c24_6830
Physcomitrella patens
1.5e-226
786.6
392
100.0
Pp3c8_10390
Physcomitrella patens
1.4e-208
726.9
378
95.2
AT4G13730
Arabidopsis thaliana
3.2e-125
449.9
379
57.3
AT1G04830
Arabidopsis thaliana
1.2e-122
441.4
349
59.3
Cre03.g195700
Chlamydomonas reinhardtii
4.7e-92
339.7
387
44.4
ENSG00000107021
Homo sapiens
6.6e-70
266.2
412
36.9
FBgn0035916
Drosophila melanogaster
4.4e-66
253.4
412
35.4
AA0047G00240
Aureococcus anophagefferens
4.6e-63
243.4
332
38.0
pte694530
Paramecium tetraurelia
6.6e-62
239.6
362
37.3
WBGene00009726
Caenorhabditis elegans
6.9e-59
229.6
429
31.2
emh362800
Emiliania huxleyi
2.7e-55
217.6
373
38.3
SPAC1952.17c
Schizosaccharomyces pombe
6.0e-55
216.5
462
31.6
Ec-14_003870
Ectocarpus siliculosus
8.7e-54
212.6
463
30.5
sya00G228890
Synedra acus
1.6e-52
208.4
240
43.8
ptri38840
Phaeodactylum tricornutum
5.8e-50
199.9
379
32.2
tho374620
Thalassiosira oceanica
5.1e-46
186.8
216
44.4
tho432140
Thalassiosira oceanica
5.1e-46
186.8
216
44.4
CC00G165650
Cyclotella cryptica
3.3e-45
184.1
220
43.2
Sro483_g152060
Seminavis robusta
1.3e-44
182.2
225
41.3
Naga_100112g19
Nannochloropsis gaditana
3.1e-43
177.6
446
30.7
ps00G97830
Pseudo-nitzschia multiseries
3.5e-39
164.1
236
39.4
PSNMU-V1.4_AUG-EV-PASAV3_0084050
Pseudo-nitzschia multistriata
2.3e-38
161.4
260
37.7
pte694790
Paramecium tetraurelia
5.7e-37
156.8
373
30.0
tps19310
Thalassiosira pseudonana
7.4e-37
156.4
192
42.2
gene11920
Fragilariopsis cylindrus
3.7e-36
154.1
333
32.1
ENSG00000131374
Homo sapiens
2.0e-34
148.3
432
28.2
pte678450
Paramecium tetraurelia
1.6e-31
138.7
321
31.2
pte499300
Paramecium tetraurelia
2.7e-31
137.9
321
30.8
tho134520
Thalassiosira oceanica
8.8e-30
132.9
389
27.2
Ec-27_002980
Ectocarpus siliculosus
2.5e-29
131.3
348
29.0
WBGene00007167
Caenorhabditis elegans
4.3e-29
130.6
395
27.8
pte289260
Paramecium tetraurelia
4.3e-29
130.6
339
26.0
pte169190
Paramecium tetraurelia
9.7e-29
129.4
329
26.4
CC00G117860
Cyclotella cryptica
2.2e-28
128.3
347
28.2
ENSG00000065491
Homo sapiens
2.4e-27
124.8
367
28.6
tps05390
Thalassiosira pseudonana
2.4e-27
124.8
348
27.6
PSNMU-V1.4_AUG-EV-PASAV3_0060250
Pseudo-nitzschia multistriata
3.1e-27
124.4
342
26.0
AT2G30710
Arabidopsis thaliana
6.9e-27
123.2
387
26.6
gene6293
Fragilariopsis cylindrus
6.9e-27
123.2
340
26.8
gsu116860
Galdieria sulphuraria
1.2e-26
122.5
193
35.2
Cre12.g486400
Chlamydomonas reinhardtii
2.0e-26
121.7
351
26.8
FBgn0038129
Drosophila melanogaster
2.0e-26
121.7
352
26.1
ps00G170430
Pseudo-nitzschia multiseries
2.6e-26
121.3
340
25.9
fso60810
Fistulifera solaris
2.2e-25
118.2
398
25.9
ptri146270
Phaeodactylum tricornutum
2.9e-25
117.9
367
25.9
ccr96380
Chondrus crispus
3.8e-25
117.5
226
31.4
ENSG00000054611
Homo sapiens
3.8e-25
117.5
368
28.5
Pp3c9_25750
Physcomitrella patens
5.0e-25
117.1
370
27.3
FBgn0038855
Drosophila melanogaster
8.5e-25
116.3
374
28.3
ccr134600
Chondrus crispus
1.1e-24
115.9
406
26.4
fso172830
Fistulifera solaris
1.4e-24
115.5
398
25.4
sya00G162590
Synedra acus
5.5e-24
113.6
344
25.9
Sro518_g158780
Seminavis robusta
4.7e-23
110.5
390
24.9
WBGene00009322
Caenorhabditis elegans
6.1e-23
110.2
337
27.9
emh339350
Emiliania huxleyi
6.1e-23
110.2
378
28.0
pte251670
Paramecium tetraurelia
3.9e-22
107.5
353
24.4
SPBC530.01
Schizosaccharomyces pombe
6.7e-22
106.7
351
25.9
pte382560
Paramecium tetraurelia
2.0e-21
105.1
389
24.4
Naga_100018g31
Nannochloropsis gaditana
4.4e-21
104.0
405
23.2
YOR070C
Saccharomyces cerevisiae strain S288C
2.2e-20
101.7
346
26.3
CM20G03540
Cyanidioschyzon merolae
1.4e-19
99.0
346
26.9
pte278500
Paramecium tetraurelia
2.4e-19
98.2
375
24.0
AA0001G02640
Aureococcus anophagefferens
4.1e-19
97.4
347
26.5
gsu63080
Galdieria sulphuraria
1.2e-18
95.9
369
27.1
AT4G29950
Arabidopsis thaliana
1.5e-18
95.5
454
23.6
pte334010
Paramecium tetraurelia
3.5e-18
94.4
345
25.5
pte103010
Paramecium tetraurelia
4.5e-18
94.0
369
23.3
pte492990
Paramecium tetraurelia
5.5e-16
87.0
371
22.4
WBGene00013016
Caenorhabditis elegans
6.1e-15
83.6
214
28.0
gsu47640
Galdieria sulphuraria
6.1e-15
83.6
214
27.6
pte155900
Paramecium tetraurelia
1.8e-14
82.0
364
21.7
AT4G28550
Arabidopsis thaliana
3.0e-14
81.3
273
26.4
FBgn0032249
Drosophila melanogaster
3.0e-14
81.3
164
31.7
pte350810
Paramecium tetraurelia
5.2e-14
80.5
267
25.8
ENSG00000121749
Homo sapiens
8.8e-14
79.7
201
26.4
pte410710
Paramecium tetraurelia
8.8e-14
79.7
318
23.0
Pp3c20_14740
Physcomitrella patens
2.6e-13
78.2
205
27.3
AT5G57210
Arabidopsis thaliana
4.4e-13
77.4
201
28.4
FBgn0031233
Drosophila melanogaster
4.4e-13
77.4
222
25.2
pte394980
Paramecium tetraurelia
4.4e-13
77.4
267
25.1
WBGene00018639
Caenorhabditis elegans
1.7e-12
75.5
202
28.2
AT2G20440
Arabidopsis thaliana
2.8e-12
74.7
159
30.2
Pp3c1_2510
Physcomitrella patens
6.3e-12
73.6
260
26.5
WBGene00008018
Caenorhabditis elegans
8.2e-12
73.2
280
24.3
pte762530
Paramecium tetraurelia
8.2e-12
73.2
254
24.8
ENSG00000104946
Homo sapiens
1.4e-11
72.4
200
27.5
AT2G19240
Arabidopsis thaliana
4.1e-11
70.9
356
23.6
ENSG00000167291
Homo sapiens
7.0e-11
70.1
166
28.9
pte442640
Paramecium tetraurelia
9.1e-11
69.7
248
25.0
AT4G27100
Arabidopsis thaliana
1.6e-10
68.9
298
21.8
AT5G54780
Arabidopsis thaliana
1.3e-09
65.9
161
26.7
SPAC630.05
Schizosaccharomyces pombe
1.3e-09
65.9
274
28.1
ENSG00000068354
Homo sapiens
1.7e-09
65.5
187
26.7
AT5G41940
Arabidopsis thaliana
2.9e-09
64.7
127
31.5
AT3G59570
Arabidopsis thaliana
2.5e-08
61.6
159
23.9
ccr161440
Chondrus crispus
3.2e-08
61.2
206
25.7
AT3G49350
Arabidopsis thaliana
7.2e-08
60.1
130
27.7
AT2G43490
Arabidopsis thaliana
1.2e-07
59.3
159
23.3
Pp3c20_8750
Physcomitrella patens
1.2e-07
59.3
36
80.6
pte61180
Paramecium tetraurelia
3.6e-07
57.8
172
28.5
pte730590
Paramecium tetraurelia
8.0e-07
56.6
226
22.6
YDL234C
Saccharomyces cerevisiae strain S288C
1.4e-06
55.8
131
27.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (5 genes)
Caenorhabditis elegans (6 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (14 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (20 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing