Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c21_3130
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c21_3130
Physcomitrella patens
2.9e-238
825.5
406
100.0
Pp3c21_3140
Physcomitrella patens
2.8e-228
792.3
478
83.9
Pp3c8_6330
Physcomitrella patens
5.5e-160
565.5
481
63.2
Pp3c2_10200
Physcomitrella patens
8.2e-156
551.6
480
60.6
Pp3c24_8550
Physcomitrella patens
6.5e-145
515.4
481
57.6
Pp3c1_28980
Physcomitrella patens
6.5e-137
488.8
436
59.2
Pp3c21_1630
Physcomitrella patens
1.9e-120
434.1
265
75.1
AT4G33260
Arabidopsis thaliana
2.7e-119
430.3
464
51.1
AT4G33270
Arabidopsis thaliana
2.3e-118
427.2
459
51.2
gsu96170
Galdieria sulphuraria
1.2e-101
371.7
411
48.9
AT5G26900
Arabidopsis thaliana
2.6e-101
370.5
413
48.2
AT5G27080
Arabidopsis thaliana
7.5e-101
369.0
414
48.6
AT5G27945
Arabidopsis thaliana
1.3e-100
368.2
273
62.6
AT5G27570
Arabidopsis thaliana
8.3e-100
365.5
405
48.6
emh414940
Emiliania huxleyi
6.6e-97
355.9
291
59.1
Cre09.g399911
Chlamydomonas reinhardtii
5.6e-96
352.8
428
47.0
PSNMU-V1.4_AUG-EV-PASAV3_0095480
Pseudo-nitzschia multistriata
1.5e-93
344.7
263
61.6
tho121140
Thalassiosira oceanica
2.9e-92
340.5
285
58.6
Ec-28_000800
Ectocarpus siliculosus
8.3e-92
339.0
273
59.7
CC00G44130
Cyclotella cryptica
3.2e-91
337.0
280
60.0
tps27090
Thalassiosira pseudonana
4.1e-91
336.7
281
59.4
Ec-16_002010
Ectocarpus siliculosus
3.5e-90
333.6
255
59.6
tps65250
Thalassiosira pseudonana
1.1e-88
328.6
291
54.6
ENSG00000117399
Homo sapiens
2.5e-88
327.4
435
40.5
ptri125300
Phaeodactylum tricornutum
7.3e-88
325.9
274
57.7
gene13157
Fragilariopsis cylindrus
1.1e-86
322.0
292
54.8
FBgn0001086
Drosophila melanogaster
2.3e-86
320.9
278
54.3
Sro589_g171680
Seminavis robusta
2.0e-85
317.8
282
56.7
PSNMU-V1.4_AUG-EV-PASAV3_0105680
Pseudo-nitzschia multistriata
2.6e-85
317.4
292
55.8
CC00G57940
Cyclotella cryptica
4.4e-85
316.6
269
56.1
ps00G28970
Pseudo-nitzschia multiseries
4.4e-85
316.6
271
56.8
Cre09.g406851
Chlamydomonas reinhardtii
5.8e-85
316.2
247
58.7
AT4G11920
Arabidopsis thaliana
2.2e-84
314.3
279
53.0
AT5G13840
Arabidopsis thaliana
4.9e-84
313.2
291
51.9
AT4G22910
Arabidopsis thaliana
1.9e-83
311.2
287
52.3
Sro103_g052460
Seminavis robusta
2.4e-83
310.8
281
54.8
fso00590
Fistulifera solaris
5.4e-83
309.7
284
55.6
fso134580
Fistulifera solaris
1.6e-82
308.1
280
56.1
ptri242330
Phaeodactylum tricornutum
2.1e-82
307.8
255
57.3
Pp3c12_23740
Physcomitrella patens
4.6e-82
306.6
276
53.6
Pp3c4_1710
Physcomitrella patens
4.6e-82
306.6
267
54.7
Pp3c3_34000
Physcomitrella patens
4.6e-82
306.6
276
54.3
Pp3c10_18160
Physcomitrella patens
1.0e-81
305.4
276
53.3
Naga_100023g51
Nannochloropsis gaditana
1.3e-81
305.1
247
58.7
gene428
Fragilariopsis cylindrus
4.3e-80
300.1
289
54.0
CM17G02420
Cyanidioschyzon merolae
2.1e-79
297.7
261
55.6
ENSG00000105325
Homo sapiens
4.7e-79
296.6
281
53.7
AA0001G03340
Aureococcus anophagefferens
2.4e-78
294.3
286
51.4
FBgn0262699
Drosophila melanogaster
6.9e-78
292.7
277
54.2
fso195350
Fistulifera solaris
1.2e-77
292.0
252
56.0
fso139640
Fistulifera solaris
4.4e-77
290.0
251
55.8
pte306690
Paramecium tetraurelia
1.9e-75
284.6
258
53.1
pte472800
Paramecium tetraurelia
9.3e-75
282.3
267
52.4
sya00G265990
Synedra acus
1.6e-74
281.6
281
49.5
SPAC144.13c
Schizosaccharomyces pombe
3.0e-73
277.3
276
48.2
SPBC1198.12
Schizosaccharomyces pombe
1.5e-72
275.0
247
51.8
WBGene00001510
Caenorhabditis elegans
1.9e-72
274.6
281
49.8
fso78880
Fistulifera solaris
2.5e-72
274.2
285
49.8
SPAC821.08c
Schizosaccharomyces pombe
3.3e-72
273.9
260
50.0
fso162020
Fistulifera solaris
1.6e-71
271.6
285
49.1
emh343840
Emiliania huxleyi
1.1e-70
268.9
210
61.4
tps150750
Thalassiosira pseudonana
2.4e-70
267.7
253
53.4
emh662650
Emiliania huxleyi
3.1e-70
267.3
387
42.4
pte611220
Paramecium tetraurelia
1.2e-69
265.4
275
47.3
pte293100
Paramecium tetraurelia
2.0e-69
264.6
258
49.6
pte392450
Paramecium tetraurelia
2.0e-69
264.6
275
46.5
pte348600
Paramecium tetraurelia
5.8e-69
263.1
258
49.2
ccr191300
Chondrus crispus
1.3e-68
261.9
220
55.9
FBgn0034937
Drosophila melanogaster
2.2e-68
261.2
282
45.0
CM01G01380
Cyanidioschyzon merolae
1.4e-67
258.5
240
51.7
YGL003C
Saccharomyces cerevisiae strain S288C
1.4e-67
258.5
257
46.7
emh174370
Emiliania huxleyi
4.2e-67
256.9
392
41.1
AA0003G01010
Aureococcus anophagefferens
1.3e-65
251.9
250
50.4
gsu94560
Galdieria sulphuraria
2.5e-64
247.7
281
45.9
ps00G112390
Pseudo-nitzschia multiseries
3.3e-64
247.3
288
47.6
sya00G85070
Synedra acus
1.8e-62
241.5
267
46.8
pte613120
Paramecium tetraurelia
9.3e-59
229.2
260
46.2
pte291360
Paramecium tetraurelia
1.2e-58
228.8
260
46.2
pte693190
Paramecium tetraurelia
1.0e-57
225.7
260
45.8
Sro1101_g241450
Seminavis robusta
3.9e-57
223.8
258
44.2
gene2402
Fragilariopsis cylindrus
5.1e-57
223.4
258
43.8
pte506460
Paramecium tetraurelia
3.3e-56
220.7
248
40.3
sya00G23420
Synedra acus
3.7e-55
217.2
260
43.5
pte503430
Paramecium tetraurelia
1.1e-54
215.7
272
37.9
pte673500
Paramecium tetraurelia
6.9e-54
213.0
248
39.9
pte658260
Paramecium tetraurelia
2.6e-53
211.1
264
41.7
pte748280
Paramecium tetraurelia
5.8e-53
209.9
247
43.3
CC00G30990
Cyclotella cryptica
6.5e-52
206.5
266
43.2
ENSG00000164287
Homo sapiens
9.3e-51
202.6
263
39.5
fso93020
Fistulifera solaris
4.3e-48
193.7
267
41.2
YGL116W
Saccharomyces cerevisiae strain S288C
4.3e-48
193.7
270
36.7
fso92980
Fistulifera solaris
4.8e-47
190.3
290
38.3
pte707680
Paramecium tetraurelia
8.2e-47
189.5
260
36.2
fso159790
Fistulifera solaris
3.1e-46
187.6
267
37.8
pte414460
Paramecium tetraurelia
9.0e-46
186.0
260
35.0
pte749100
Paramecium tetraurelia
4.5e-45
183.7
260
34.6
fso159510
Fistulifera solaris
1.3e-44
182.2
290
36.6
pte708930
Paramecium tetraurelia
5.0e-44
180.3
262
40.5
fso159730
Fistulifera solaris
6.5e-44
179.9
276
37.3
emh289720
Emiliania huxleyi
1.1e-43
179.1
152
57.2
fso36200
Fistulifera solaris
7.2e-43
176.4
278
36.3
ptri146850
Phaeodactylum tricornutum
5.1e-41
170.2
259
36.3
sya00G43700
Synedra acus
4.3e-40
167.2
176
44.3
ps00G182890
Pseudo-nitzschia multiseries
2.2e-39
164.9
252
36.5
emh32870
Emiliania huxleyi
5.3e-38
160.2
189
46.6
PSNMU-V1.4_AUG-EV-PASAV3_0043280
Pseudo-nitzschia multistriata
2.9e-36
154.5
260
35.4
pte383100
Paramecium tetraurelia
7.2e-35
149.8
251
34.7
pte251190
Paramecium tetraurelia
2.7e-34
147.9
251
34.3
Naga_100321g1
Nannochloropsis gaditana
7.9e-34
146.4
123
54.5
Pp3c18_20650
Physcomitrella patens
1.0e-33
146.0
222
46.8
fso36170
Fistulifera solaris
1.8e-33
145.2
130
48.5
fso36260
Fistulifera solaris
1.5e-32
142.1
130
47.7
AA0106G00010
Aureococcus anophagefferens
3.3e-32
141.0
78
78.2
YGR225W
Saccharomyces cerevisiae strain S288C
5.7e-32
140.2
181
39.8
pte592600
Paramecium tetraurelia
1.3e-31
139.0
247
32.8
pte712080
Paramecium tetraurelia
1.3e-31
139.0
247
32.8
emh447100
Emiliania huxleyi
3.7e-31
137.5
267
35.2
ccr147000
Chondrus crispus
1.2e-29
132.5
126
52.4
SPCC1620.04c
Schizosaccharomyces pombe
2.6e-29
131.3
276
30.4
WBGene00001511
Caenorhabditis elegans
9.4e-27
122.9
290
28.6
tps22280
Thalassiosira pseudonana
2.7e-26
121.3
254
31.9
tps39620
Thalassiosira pseudonana
2.7e-26
121.3
254
31.9
SPAC13G6.08
Schizosaccharomyces pombe
1.1e-24
115.9
273
29.7
pte415590
Paramecium tetraurelia
4.4e-24
114.0
111
52.3
ptri143190
Phaeodactylum tricornutum
7.4e-24
113.2
283
29.7
pte415610
Paramecium tetraurelia
3.1e-22
107.8
74
63.5
emh445900
Emiliania huxleyi
4.1e-14
80.9
175
31.4
gsu30210
Galdieria sulphuraria
5.3e-14
80.5
272
25.4
gsu30230
Galdieria sulphuraria
5.3e-14
80.5
272
25.4
pte07750
Paramecium tetraurelia
4.5e-13
77.4
81
46.9
fso159480
Fistulifera solaris
1.0e-12
76.3
106
34.9
tho288600
Thalassiosira oceanica
1.7e-12
75.5
264
27.3
Pp3c18_20640
Physcomitrella patens
1.6e-10
68.9
119
40.3
Cre06.g254150
Chlamydomonas reinhardtii
6.1e-10
67.0
251
24.7
Sro26_g017620
Seminavis robusta
6.1e-10
67.0
257
24.1
emh279760
Emiliania huxleyi
8.0e-10
66.6
179
29.1
AT2G33340
Arabidopsis thaliana
1.4e-09
65.9
196
24.0
WBGene00011051
Caenorhabditis elegans
1.8e-09
65.5
112
33.9
emh499270
Emiliania huxleyi
1.8e-09
65.5
313
22.0
Pp3c6_19920
Physcomitrella patens
1.8e-09
65.5
188
24.5
Cre04.g222000
Chlamydomonas reinhardtii
4.0e-09
64.3
236
25.8
sya00G188900
Synedra acus
5.2e-09
63.9
262
23.7
gene3334
Fragilariopsis cylindrus
8.8e-09
63.2
235
24.7
gene2763
Fragilariopsis cylindrus
8.8e-09
63.2
236
24.6
pte331790
Paramecium tetraurelia
8.8e-09
63.2
167
31.1
YDR364C
Saccharomyces cerevisiae strain S288C
2.0e-08
62.0
185
28.1
emh595350
Emiliania huxleyi
3.4e-08
61.2
223
25.6
ENSG00000075826
Homo sapiens
3.4e-08
61.2
226
27.0
Pp3c12_9400
Physcomitrella patens
4.4e-08
60.8
213
28.6
SPAC31A2.14
Schizosaccharomyces pombe
4.4e-08
60.8
205
22.9
sya00G04600
Synedra acus
1.3e-07
59.3
144
29.2
CM19G02410
Cyanidioschyzon merolae
2.8e-07
58.2
172
27.9
Ec-17_002790
Ectocarpus siliculosus
3.7e-07
57.8
181
25.4
Cre06.g255400
Chlamydomonas reinhardtii
4.8e-07
57.4
229
22.7
tps100390
Thalassiosira pseudonana
4.8e-07
57.4
252
22.2
FBgn0033526
Drosophila melanogaster
1.4e-06
55.8
133
28.6
AA0013G01130
Aureococcus anophagefferens
1.8e-06
55.5
54
50.0
WBGene00021316
Caenorhabditis elegans
2.4e-06
55.1
167
25.7
AT1G36070
Arabidopsis thaliana
3.1e-06
54.7
117
27.4
ptri102920
Phaeodactylum tricornutum
4.1e-06
54.3
134
29.9
Naga_100083g16
Nannochloropsis gaditana
5.4e-06
53.9
183
23.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (6 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (15 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (6 genes)
Arabidopsis thaliana (11 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (11 genes)
Paramecium tetraurelia (26 genes)
Seminavis robusta (4 genes)
Synedra acus (6 genes)
Physcomitrella patens (15 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing