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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c14_17210
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c14_17210
Physcomitrella patens
0.0e+00
1618.2
848
100.0
Pp3c10_16040
Physcomitrella patens
0.0e+00
1279.6
748
89.4
AT3G10390
Arabidopsis thaliana
6.0e-209
729.2
588
61.1
AT3G13682
Arabidopsis thaliana
3.8e-195
683.3
634
55.0
AT1G62830
Arabidopsis thaliana
1.4e-194
681.4
614
56.7
Cre07.g318651
Chlamydomonas reinhardtii
8.9e-112
406.4
708
36.9
ENSG00000004487
Homo sapiens
2.4e-93
345.1
659
34.9
FBgn0260397
Drosophila melanogaster
1.3e-91
339.3
654
34.4
CM15G01040
Cyanidioschyzon merolae
4.6e-84
314.3
516
37.0
AT4G16310
Arabidopsis thaliana
5.6e-82
307.4
520
36.3
Pp3c1_1170
Physcomitrella patens
5.3e-80
300.8
582
35.1
gsu121740
Galdieria sulphuraria
3.4e-79
298.1
591
35.9
Pp3c1_6380
Physcomitrella patens
1.6e-76
289.3
596
34.2
Pp3c1_6385
Physcomitrella patens
1.6e-76
289.3
596
34.2
ccr81740
Chondrus crispus
3.2e-69
265.0
631
31.2
ccr191780
Chondrus crispus
6.9e-56
220.7
520
31.5
emh539350
Emiliania huxleyi
1.9e-53
212.6
315
40.0
WBGene00000137
Caenorhabditis elegans
5.9e-47
191.0
544
27.8
ptri181790
Phaeodactylum tricornutum
1.7e-46
189.5
530
28.3
fso71680
Fistulifera solaris
3.2e-45
185.3
584
28.3
gene1205
Fragilariopsis cylindrus
2.1e-44
182.6
451
30.2
fso191050
Fistulifera solaris
2.3e-43
179.1
585
28.0
ptri132410
Phaeodactylum tricornutum
3.9e-43
178.3
573
28.1
AT2G43020
Arabidopsis thaliana
6.7e-43
177.6
480
30.0
AT1G65840
Arabidopsis thaliana
8.8e-43
177.2
455
29.7
ps00G52170
Pseudo-nitzschia multiseries
1.1e-42
176.8
482
28.2
AT3G59050
Arabidopsis thaliana
1.5e-42
176.4
458
28.8
Ec-24_001850
Ectocarpus siliculosus
4.8e-41
171.4
205
46.3
fso155420
Fistulifera solaris
1.1e-40
170.2
595
25.0
Pp3c9_8130
Physcomitrella patens
1.8e-40
169.5
483
28.6
Pp3c9_8100
Physcomitrella patens
1.8e-40
169.5
483
28.6
Sro1581_g283780
Seminavis robusta
2.0e-39
166.0
571
26.3
fso150120
Fistulifera solaris
4.5e-39
164.9
601
25.0
sya00G12820
Synedra acus
5.0e-38
161.4
547
27.1
Pp3c15_18820
Physcomitrella patens
1.4e-37
159.8
438
28.1
Sro1456_g274230
Seminavis robusta
3.6e-36
155.2
486
30.7
Sro738_g195300
Seminavis robusta
6.1e-36
154.5
465
30.5
gsu72430
Galdieria sulphuraria
1.4e-35
153.3
494
30.2
Cre10.g447767
Chlamydomonas reinhardtii
1.8e-35
152.9
492
28.3
emh163540
Emiliania huxleyi
6.7e-35
151.0
193
40.9
Sro982_g227750
Seminavis robusta
3.3e-34
148.7
470
29.4
Sro2365_g325020
Seminavis robusta
3.3e-34
148.7
470
29.4
Sro1832_g300430
Seminavis robusta
7.4e-34
147.5
515
27.8
emh532160
Emiliania huxleyi
1.1e-32
143.7
284
36.3
sya00G238230
Synedra acus
3.5e-31
138.7
473
26.8
WBGene00005010
Caenorhabditis elegans
5.9e-31
137.9
666
23.4
AT4G29720
Arabidopsis thaliana
1.7e-30
136.3
534
26.2
ENSG00000148832
Homo sapiens
2.5e-29
132.5
517
26.7
tho241420
Thalassiosira oceanica
5.5e-29
131.3
610
25.6
Pp3s34_620
Physcomitrella patens
7.2e-29
131.0
224
33.9
ENSG00000088826
Homo sapiens
1.6e-28
129.8
563
25.4
AT5G13700
Arabidopsis thaliana
3.6e-28
128.6
449
26.3
emh163520
Emiliania huxleyi
1.4e-27
126.7
198
39.9
PSNMU-V1.4_AUG-EV-PASAV3_0059180
Pseudo-nitzschia multistriata
3.0e-27
125.6
311
28.6
SPBC146.09c
Schizosaccharomyces pombe
5.2e-27
124.8
603
21.7
FBgn0037606
Drosophila melanogaster
6.7e-27
124.4
541
25.0
PSNMU-V1.4_AUG-EV-PASAV3_0079500
Pseudo-nitzschia multistriata
9.7e-26
120.6
480
27.3
tho251140
Thalassiosira oceanica
1.3e-25
120.2
463
26.6
tho216080
Thalassiosira oceanica
6.3e-25
117.9
452
27.0
gene8256
Fragilariopsis cylindrus
1.1e-24
117.1
228
33.8
Sro619_g176360
Seminavis robusta
3.1e-24
115.5
274
34.3
tho100460
Thalassiosira oceanica
3.1e-24
115.5
246
35.4
tho16540
Thalassiosira oceanica
1.2e-23
113.6
523
26.2
WBGene00011615
Caenorhabditis elegans
1.7e-22
109.8
236
30.5
gene18307
Fragilariopsis cylindrus
6.5e-22
107.8
475
26.9
tho285040
Thalassiosira oceanica
6.5e-22
107.8
479
26.3
PSNMU-V1.4_AUG-EV-PASAV3_0030440
Pseudo-nitzschia multistriata
8.5e-22
107.5
477
27.7
FBgn0033584
Drosophila melanogaster
1.5e-21
106.7
509
26.5
Pp3c2_35433
Physcomitrella patens
3.2e-21
105.5
160
40.6
tho162980
Thalassiosira oceanica
3.2e-21
105.5
249
32.1
ps00G88080
Pseudo-nitzschia multiseries
4.2e-21
105.1
226
33.6
AA0005G05200
Aureococcus anophagefferens
5.5e-21
104.8
257
34.6
Pp3c19_16810
Physcomitrella patens
1.6e-20
103.2
480
24.2
Cre09.g389250
Chlamydomonas reinhardtii
2.1e-20
102.8
461
27.3
Sro111_g055430
Seminavis robusta
2.1e-20
102.8
225
36.0
fso136320
Fistulifera solaris
6.1e-20
101.3
520
24.8
Sro654_g182120
Seminavis robusta
8.0e-20
100.9
270
31.5
FBgn0035943
Drosophila melanogaster
3.0e-19
99.0
490
27.3
PSNMU-V1.4_AUG-EV-PASAV3_0007610
Pseudo-nitzschia multistriata
3.0e-19
99.0
264
31.1
WBGene00000139
Caenorhabditis elegans
1.2e-18
97.1
468
26.7
FBgn0002036
Drosophila melanogaster
1.2e-18
97.1
480
25.6
PSNMU-V1.4_AUG-EV-PASAV3_0032800
Pseudo-nitzschia multistriata
3.4e-18
95.5
267
31.1
fso33040
Fistulifera solaris
5.7e-18
94.7
540
23.5
tho443760
Thalassiosira oceanica
7.5e-18
94.4
205
33.2
Sro436_g142640
Seminavis robusta
2.8e-17
92.4
259
28.2
PSNMU-V1.4_AUG-EV-PASAV3_0102820
Pseudo-nitzschia multistriata
3.7e-17
92.0
280
28.2
WBGene00016061
Caenorhabditis elegans
6.3e-17
91.3
473
24.1
Sro306_g113050
Seminavis robusta
6.3e-17
91.3
362
27.1
tho135260
Thalassiosira oceanica
6.3e-17
91.3
476
27.7
gene6071
Fragilariopsis cylindrus
1.1e-16
90.5
326
24.8
FBgn0036750
Drosophila melanogaster
1.8e-16
89.7
479
24.6
AA0014G00960
Aureococcus anophagefferens
2.4e-16
89.4
439
24.4
tho198900
Thalassiosira oceanica
2.4e-16
89.4
203
32.5
tho412380
Thalassiosira oceanica
3.1e-16
89.0
203
32.0
FBgn0036749
Drosophila melanogaster
2.7e-15
85.9
502
25.3
gene15596
Fragilariopsis cylindrus
3.5e-15
85.5
444
26.8
Pp3c2_35420
Physcomitrella patens
3.5e-15
85.5
144
34.0
Sro1244_g255600
Seminavis robusta
5.9e-15
84.7
485
24.3
tho88340
Thalassiosira oceanica
1.0e-14
84.0
488
23.8
Pp3c16_25920
Physcomitrella patens
1.7e-14
83.2
501
23.0
Sro213_g088370
Seminavis robusta
6.5e-14
81.3
251
28.3
Naga_100375g5
Nannochloropsis gaditana
1.5e-13
80.1
465
25.2
gene6120
Fragilariopsis cylindrus
5.5e-13
78.2
168
31.0
sya00G22120
Synedra acus
5.5e-13
78.2
285
27.0
ENSG00000069535
Homo sapiens
3.6e-12
75.5
490
22.4
sya00G238240
Synedra acus
1.0e-11
73.9
79
40.5
ENSG00000104951
Homo sapiens
3.0e-11
72.4
478
25.7
ps00G110090
Pseudo-nitzschia multiseries
3.0e-11
72.4
211
28.0
tho263520
Thalassiosira oceanica
3.4e-10
68.9
223
28.3
AA0006G03670
Aureococcus anophagefferens
4.4e-10
68.6
460
24.3
ccr88560
Chondrus crispus
2.2e-09
66.2
156
34.6
ENSG00000189221
Homo sapiens
2.2e-09
66.2
459
20.0
ptri58240
Phaeodactylum tricornutum
3.7e-09
65.5
296
25.0
CC00G135400
Cyclotella cryptica
1.4e-08
63.5
116
34.5
CC00G191420
Cyclotella cryptica
1.8e-08
63.2
79
43.0
pte428750
Paramecium tetraurelia
1.8e-08
63.2
459
22.7
emh408280
Emiliania huxleyi
2.4e-08
62.8
420
24.3
emh148220
Emiliania huxleyi
2.4e-08
62.8
420
24.3
tho458580
Thalassiosira oceanica
3.1e-08
62.4
240
27.9
CC00G18190
Cyclotella cryptica
5.4e-08
61.6
100
35.0
CC00G143320
Cyclotella cryptica
7.0e-08
61.2
115
37.4
YMR020W
Saccharomyces cerevisiae strain S288C
3.5e-07
58.9
317
27.8
gene7184
Fragilariopsis cylindrus
7.7e-07
57.8
230
26.1
Sro913_g219440
Seminavis robusta
1.3e-06
57.0
231
27.3
tho415960
Thalassiosira oceanica
1.3e-06
57.0
77
40.3
CC00G91040
Cyclotella cryptica
1.7e-06
56.6
109
32.1
Ec-21_006430
Ectocarpus siliculosus
1.7e-06
56.6
333
24.0
Sro1258_g256830
Seminavis robusta
1.7e-06
56.6
507
20.5
emh216950
Emiliania huxleyi
3.8e-06
55.5
110
34.5
Ec-04_005780
Ectocarpus siliculosus
6.6e-06
54.7
97
35.1
SPAC23E2.02
Schizosaccharomyces pombe
6.6e-06
54.7
145
31.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (15 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (7 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (7 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (15 genes)
Synedra acus (4 genes)
Physcomitrella patens (13 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing