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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0096010
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0096010
Pseudo-nitzschia multistriata
4.9e-139
495.4
283
100.0
ps00G145580
Pseudo-nitzschia multiseries
4.6e-121
435.6
283
81.6
Sro740_g195550
Seminavis robusta
6.7e-72
272.3
275
62.2
Sro68_g037840
Seminavis robusta
3.3e-71
270.0
275
61.5
fso167070
Fistulifera solaris
2.7e-65
250.4
278
57.9
ptri147470
Phaeodactylum tricornutum
6.3e-62
239.2
271
56.1
tho357060
Thalassiosira oceanica
2.9e-59
230.3
266
50.0
tps147910
Thalassiosira pseudonana
2.5e-58
227.3
276
55.1
sya00G83970
Synedra acus
1.6e-57
224.6
261
55.6
Sro731_g194150
Seminavis robusta
7.4e-55
215.7
203
67.5
CC00G41180
Cyclotella cryptica
1.4e-53
211.5
283
51.9
fso121810
Fistulifera solaris
1.4e-53
211.5
262
55.0
gene2813
Fragilariopsis cylindrus
1.8e-48
194.5
170
75.3
Naga_100199g6
Nannochloropsis gaditana
4.2e-42
173.3
269
40.9
AT1G47260
Arabidopsis thaliana
4.1e-37
156.8
255
40.4
AT1G19580
Arabidopsis thaliana
2.9e-35
150.6
206
43.7
tho589540
Thalassiosira oceanica
5.5e-34
146.4
119
60.5
Pp3c7_4200
Physcomitrella patens
1.2e-28
128.6
232
44.8
CM13G00520
Cyanidioschyzon merolae
6.5e-27
122.9
219
47.9
gsu30790
Galdieria sulphuraria
8.5e-27
122.5
250
45.2
Pp3c4_16870
Physcomitrella patens
3.6e-25
117.1
229
41.9
Pp3c11_22520
Physcomitrella patens
8.0e-25
115.9
262
38.5
AT5G66510
Arabidopsis thaliana
2.2e-22
107.8
246
41.1
pte725170
Paramecium tetraurelia
9.2e-21
102.4
221
31.2
pte791750
Paramecium tetraurelia
3.5e-20
100.5
221
30.8
AA0003G02530
Aureococcus anophagefferens
4.5e-20
100.1
157
38.2
AA0230G00030
Aureococcus anophagefferens
4.5e-20
100.1
157
38.2
Pp3c1_7500
Physcomitrella patens
1.7e-19
98.2
161
35.4
gsu91670
Galdieria sulphuraria
5.0e-19
96.7
213
32.4
fso23950
Fistulifera solaris
1.1e-18
95.5
185
36.2
fso198020
Fistulifera solaris
1.1e-18
95.5
185
36.8
ps00G40950
Pseudo-nitzschia multiseries
7.3e-18
92.8
188
38.8
ps00G81530
Pseudo-nitzschia multiseries
7.3e-18
92.8
164
36.0
Sro796_g203670
Seminavis robusta
1.2e-17
92.0
246
32.5
sya00G77040
Synedra acus
2.1e-17
91.3
220
34.1
gene4461
Fragilariopsis cylindrus
3.6e-17
90.5
173
35.8
ptri08410
Phaeodactylum tricornutum
8.0e-17
89.4
207
30.9
ptri08530
Phaeodactylum tricornutum
8.0e-17
89.4
207
30.9
Cre06.g293850
Chlamydomonas reinhardtii
1.4e-16
88.6
180
31.1
Cre09.g415850
Chlamydomonas reinhardtii
5.2e-16
86.7
188
42.0
sya00G174380
Synedra acus
2.0e-15
84.7
155
48.4
emh726740
Emiliania huxleyi
3.4e-15
84.0
213
40.8
CC00G151430
Cyclotella cryptica
1.7e-14
81.6
182
42.9
AA0002G00020
Aureococcus anophagefferens
7.8e-12
72.8
167
41.9
tps56830
Thalassiosira pseudonana
1.3e-11
72.0
164
34.8
gsu34770
Galdieria sulphuraria
1.1e-10
68.9
180
29.4
pte113000
Paramecium tetraurelia
4.3e-10
67.0
86
40.7
pte474410
Paramecium tetraurelia
1.6e-09
65.1
84
40.5
Ec-07_004610
Ectocarpus siliculosus
3.6e-09
63.9
174
41.4
fso79830
Fistulifera solaris
6.2e-09
63.2
188
37.2
emh676960
Emiliania huxleyi
8.0e-09
62.8
79
39.2
Sro49_g028820
Seminavis robusta
8.0e-09
62.8
221
37.1
Ec-10_002770
Ectocarpus siliculosus
1.0e-08
62.4
162
42.6
fso122780
Fistulifera solaris
1.8e-08
61.6
188
36.7
tho558160
Thalassiosira oceanica
2.3e-08
61.2
197
27.4
ccr103560
Chondrus crispus
5.2e-08
60.1
232
36.2
pte777030
Paramecium tetraurelia
5.2e-08
60.1
237
25.3
Naga_100187g5
Nannochloropsis gaditana
6.8e-08
59.7
95
38.9
CC00G42060
Cyclotella cryptica
2.0e-07
58.2
195
28.7
Cre12.g516450
Chlamydomonas reinhardtii
2.6e-07
57.8
88
37.5
Pp3c7_19540
Physcomitrella patens
4.4e-07
57.0
158
39.9
ps00G37150
Pseudo-nitzschia multiseries
2.2e-06
54.7
246
23.2
AT5G63510
Arabidopsis thaliana
6.4e-06
53.1
77
39.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (5 genes)
Synedra acus (3 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing