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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Naga_100028g26
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Naga_100028g26
Nannochloropsis gaditana
1.4e-243
843.2
415
100.0
Sro229_g092870
Seminavis robusta
6.9e-25
116.7
203
36.9
sya00G197760
Synedra acus
4.5e-24
114.0
219
32.9
gene2326
Fragilariopsis cylindrus
1.7e-23
112.1
219
29.7
ptri90680
Phaeodactylum tricornutum
2.4e-22
108.2
216
33.8
emh700880
Emiliania huxleyi
1.8e-20
102.1
235
31.1
emh262510
Emiliania huxleyi
1.8e-20
102.1
235
31.1
fso200540
Fistulifera solaris
2.5e-19
98.2
214
29.9
AT5G19630
Arabidopsis thaliana
9.0e-17
89.7
204
29.9
Pp3c25_340
Physcomitrella patens
7.6e-16
86.7
200
27.0
fso164040
Fistulifera solaris
1.0e-15
86.3
223
27.4
ps00G02390
Pseudo-nitzschia multiseries
3.8e-15
84.3
165
31.5
Pp3c7_25270
Physcomitrella patens
1.4e-14
82.4
178
30.3
AA0017G01370
Aureococcus anophagefferens
5.5e-14
80.5
213
27.7
sya00G130210
Synedra acus
4.1e-09
64.3
198
26.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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