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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-20_002330
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-20_002330
Ectocarpus siliculosus
5.3e-180
631.7
344
100.0
ENSG00000204843
Homo sapiens
1.4e-18
95.5
112
46.4
emh391060
Emiliania huxleyi
7.0e-15
83.2
86
54.7
emh377330
Emiliania huxleyi
5.0e-13
77.0
95
47.4
emh366960
Emiliania huxleyi
5.0e-13
77.0
95
47.4
emh37480
Emiliania huxleyi
5.0e-13
77.0
95
47.4
ENSG00000115295
Homo sapiens
6.5e-13
76.6
78
44.9
AA0010G02410
Aureococcus anophagefferens
8.5e-13
76.3
51
60.8
Ec-24_000670
Ectocarpus siliculosus
8.5e-13
76.3
67
52.2
ENSG00000197892
Homo sapiens
4.2e-12
73.9
71
49.3
Ec-03_001520
Ectocarpus siliculosus
9.4e-12
72.8
67
50.7
SPAC27D7.13c
Schizosaccharomyces pombe
2.1e-11
71.6
55
54.5
AA0009G02030
Aureococcus anophagefferens
1.4e-10
68.9
63
52.4
FBgn0001108
Drosophila melanogaster
3.0e-10
67.8
95
40.0
ENSG00000106665
Homo sapiens
5.2e-10
67.0
141
35.5
emh273090
Emiliania huxleyi
8.8e-10
66.2
52
53.8
Pp3c13_18250
Physcomitrella patens
8.8e-10
66.2
67
47.8
AA0007G03430
Aureococcus anophagefferens
3.4e-09
64.3
67
47.8
FBgn0036882
Drosophila melanogaster
3.4e-09
64.3
62
48.4
ENSG00000130779
Homo sapiens
5.7e-09
63.5
75
46.7
WBGene00009987
Caenorhabditis elegans
7.5e-09
63.2
53
54.7
Naga_100182g8
Nannochloropsis gaditana
2.2e-08
61.6
60
45.0
AA0029G00510
Aureococcus anophagefferens
3.7e-08
60.8
49
46.9
ENSG00000135837
Homo sapiens
3.7e-08
60.8
58
43.1
ENSG00000105254
Homo sapiens
3.7e-08
60.8
50
52.0
ENSG00000105270
Homo sapiens
4.8e-08
60.5
111
35.1
WBGene00001017
Caenorhabditis elegans
8.3e-08
59.7
88
39.8
FBgn0020503
Drosophila melanogaster
8.3e-08
59.7
62
45.2
ccr13880
Chondrus crispus
1.1e-07
59.3
69
44.9
Ec-17_002120
Ectocarpus siliculosus
1.1e-07
59.3
53
54.7
AA0026G00990
Aureococcus anophagefferens
1.4e-07
58.9
53
43.4
Pp3c13_4420
Physcomitrella patens
1.8e-07
58.5
71
46.5
AA0005G04290
Aureococcus anophagefferens
3.1e-07
57.8
68
42.6
CM01G00360
Cyanidioschyzon merolae
7.0e-07
56.6
65
44.6
AT3G10220
Arabidopsis thaliana
1.6e-06
55.5
67
41.8
sya00G57220
Synedra acus
1.6e-06
55.5
60
50.0
pte264150
Paramecium tetraurelia
2.0e-06
55.1
69
39.1
AA0005G03080
Aureococcus anophagefferens
3.5e-06
54.3
65
44.6
WBGene00010796
Caenorhabditis elegans
7.7e-06
53.1
87
34.5
fso159070
Fistulifera solaris
7.7e-06
53.1
69
44.9
Pp3c9_6720
Physcomitrella patens
7.7e-06
53.1
71
45.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (7 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (0 genes)
Synedra acus (1 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing