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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-05_005380
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-05_005380
Ectocarpus siliculosus
1.2e-59
230.3
117
100.0
Ec-18_004580
Ectocarpus siliculosus
6.2e-24
111.7
96
57.3
Ec-06_006950
Ectocarpus siliculosus
2.7e-19
96.3
108
47.2
Ec-18_004560
Ectocarpus siliculosus
1.8e-18
93.6
97
48.5
Ec-18_000100
Ectocarpus siliculosus
3.0e-18
92.8
90
47.8
Ec-06_007360
Ectocarpus siliculosus
5.1e-18
92.0
98
42.9
Ec-06_007280
Ectocarpus siliculosus
6.7e-18
91.7
92
46.7
Ec-21_005470
Ectocarpus siliculosus
1.9e-17
90.1
91
46.2
Ec-17_002390
Ectocarpus siliculosus
9.6e-17
87.8
91
45.1
Ec-06_007290
Ectocarpus siliculosus
2.1e-16
86.7
92
44.6
Ec-21_005500
Ectocarpus siliculosus
2.6e-14
79.7
92
40.2
Pp3c25_6140
Physcomitrella patens
2.2e-13
76.6
95
40.0
AT5G13740
Arabidopsis thaliana
2.9e-13
76.3
97
40.2
AT3G43790
Arabidopsis thaliana
3.8e-13
75.9
97
38.1
Pp3c16_14400
Physcomitrella patens
1.4e-12
73.9
95
38.9
Ec-06_006980
Ectocarpus siliculosus
2.5e-12
73.2
93
39.8
fso79810
Fistulifera solaris
4.2e-12
72.4
83
48.2
ptri184450
Phaeodactylum tricornutum
5.5e-12
72.0
84
51.2
AA0023G00050
Aureococcus anophagefferens
7.2e-12
71.6
84
45.2
fso122760
Fistulifera solaris
7.2e-12
71.6
83
47.0
AT5G13750
Arabidopsis thaliana
1.6e-11
70.5
97
39.2
ps00G69840
Pseudo-nitzschia multiseries
2.1e-11
70.1
83
45.8
PSNMU-V1.4_AUG-EV-PASAV3_0103790
Pseudo-nitzschia multistriata
7.9e-11
68.2
83
47.0
ps00G130240
Pseudo-nitzschia multiseries
2.3e-10
66.6
83
43.4
gsu37510
Galdieria sulphuraria
3.9e-10
65.9
96
34.4
ps00G113170
Pseudo-nitzschia multiseries
3.9e-10
65.9
83
43.4
tho275060
Thalassiosira oceanica
3.9e-10
65.9
86
43.0
gene15245
Fragilariopsis cylindrus
8.7e-10
64.7
83
45.8
ps00G171600
Pseudo-nitzschia multiseries
2.5e-09
63.2
82
43.9
emh470610
Emiliania huxleyi
3.3e-09
62.8
93
39.8
emh425680
Emiliania huxleyi
3.3e-09
62.8
93
39.8
sya00G47590
Synedra acus
4.3e-09
62.4
86
39.5
sya00G65700
Synedra acus
4.3e-09
62.4
86
39.5
sya00G259240
Synedra acus
4.3e-09
62.4
86
39.5
gene14853
Fragilariopsis cylindrus
7.4e-09
61.6
83
43.4
ps00G174520
Pseudo-nitzschia multiseries
1.6e-08
60.5
82
41.5
AA0006G01760
Aureococcus anophagefferens
2.2e-08
60.1
88
33.0
YCR023C
Saccharomyces cerevisiae strain S288C
2.2e-08
60.1
109
35.8
gsu89500
Galdieria sulphuraria
2.8e-08
59.7
95
32.6
AA0011G00090
Aureococcus anophagefferens
3.7e-08
59.3
95
40.0
emh667020
Emiliania huxleyi
6.3e-08
58.5
87
41.4
emh769880
Emiliania huxleyi
1.4e-07
57.4
87
39.1
gsu41750
Galdieria sulphuraria
5.3e-07
55.5
95
30.5
emh612690
Emiliania huxleyi
6.9e-07
55.1
71
42.3
emh177900
Emiliania huxleyi
6.9e-07
55.1
71
42.3
emh570200
Emiliania huxleyi
9.0e-07
54.7
85
32.9
PSNMU-V1.4_AUG-EV-PASAV3_0095100
Pseudo-nitzschia multistriata
1.5e-06
53.9
82
42.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (12 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing