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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Cre01.g029200
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Cre01.g029200
Chlamydomonas reinhardtii
0.0e+00
3217.9
2379
100.0
AT4G22970
Arabidopsis thaliana
4.5e-44
183.0
287
38.7
Pp3c8_2900
Physcomitrella patens
8.4e-43
178.7
226
40.3
SPCC5E4.04
Schizosaccharomyces pombe
8.7e-40
168.7
250
39.2
ENSG00000135476
Homo sapiens
1.1e-39
168.3
275
36.7
emh532340
Emiliania huxleyi
5.3e-37
159.5
244
39.3
gsu63660
Galdieria sulphuraria
2.1e-33
147.5
259
34.4
YGR098C
Saccharomyces cerevisiae strain S288C
1.1e-31
141.7
253
32.0
ccr167560
Chondrus crispus
2.5e-31
140.6
253
35.6
CC00G101230
Cyclotella cryptica
3.3e-31
140.2
281
31.3
sya00G250390
Synedra acus
6.3e-30
136.0
276
32.6
Naga_100006g40
Nannochloropsis gaditana
5.0e-27
126.3
204
37.3
Sro289_g109220
Seminavis robusta
5.0e-27
126.3
304
31.6
tps46450
Thalassiosira pseudonana
8.5e-27
125.6
257
31.5
PSNMU-V1.4_AUG-EV-PASAV3_0104990
Pseudo-nitzschia multistriata
1.6e-25
121.3
289
31.5
ptri65980
Phaeodactylum tricornutum
2.2e-22
110.9
275
29.8
gene1703
Fragilariopsis cylindrus
1.4e-21
108.2
277
29.6
ps00G180250
Pseudo-nitzschia multiseries
1.4e-21
108.2
280
30.0
WBGene00004775
Caenorhabditis elegans
7.7e-20
102.4
195
32.3
AA0051G00160
Aureococcus anophagefferens
1.8e-16
91.3
261
30.3
CM04G01580
Cyanidioschyzon merolae
1.3e-14
85.1
250
32.4
pte727590
Paramecium tetraurelia
2.4e-13
80.9
200
28.5
WBGene00022741
Caenorhabditis elegans
1.5e-10
71.6
175
29.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing