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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CYCR_CHL00G01210
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CYCR_CHL00G01210
Cyclotella cryptica
8.7e-70
264.2
135
100.0
thoC03060
Thalassiosira oceanica
2.3e-62
239.6
135
87.4
tpsC02730
Thalassiosira pseudonana
3.0e-62
239.2
135
87.4
ptri_chlor02350
Phaeodactylum tricornutum
7.4e-53
208.0
132
76.5
syaC01140
Synedra acus
1.8e-51
203.4
132
75.8
fsoC00620
Fistulifera solaris
4.9e-49
195.3
131
71.0
psmC00320
Pseudo-nitzschia multiseries
1.2e-47
190.7
132
71.2
ccr_chlor00G00760
Chondrus crispus
4.8e-36
152.1
125
60.8
esiC00570
Ectocarpus siliculosus
2.3e-30
133.3
143
53.8
gsu_chlor00G00380
Galdieria sulphuraria
1.4e-27
124.0
134
52.2
Pp3c12_1790
Physcomitrella patens
2.4e-27
123.2
125
56.0
AT1G74970
Arabidopsis thaliana
4.5e-26
119.0
126
54.0
ngaC00350
Nannochloropsis gaditana
3.8e-25
115.9
134
49.3
AACG00650
Aureococcus anophagefferens
1.9e-24
113.6
130
51.5
ps00G41270
Pseudo-nitzschia multiseries
2.2e-20
100.1
123
47.2
sya00G215200
Synedra acus
9.1e-19
94.7
123
49.6
AA0081G00080
Aureococcus anophagefferens
1.2e-18
94.4
127
44.1
sya00G45690
Synedra acus
1.6e-18
94.0
128
46.9
tho322260
Thalassiosira oceanica
4.5e-18
92.4
125
45.6
CC00G192140
Cyclotella cryptica
1.7e-17
90.5
125
44.0
tps55980
Thalassiosira pseudonana
1.7e-17
90.5
127
44.1
Sro91_g047660
Seminavis robusta
2.9e-17
89.7
126
46.0
ccr100340
Chondrus crispus
6.5e-17
88.6
124
44.4
AT3G49080
Arabidopsis thaliana
1.9e-16
87.0
125
40.8
PSNMU-V1.4_AUG-EV-PASAV3_0039110
Pseudo-nitzschia multistriata
1.6e-15
84.0
126
45.2
fso16150
Fistulifera solaris
2.1e-15
83.6
126
44.4
fso117830
Fistulifera solaris
2.1e-15
83.6
126
44.4
Pp3c9_4940
Physcomitrella patens
2.7e-15
83.2
96
49.0
Pp3c4_6350
Physcomitrella patens
4.7e-15
82.4
123
40.7
ps00G92440
Pseudo-nitzschia multiseries
8.0e-15
81.6
126
46.0
CM17G01750
Cyanidioschyzon merolae
1.8e-14
80.5
142
38.0
Ec-13_004660
Ectocarpus siliculosus
1.8e-14
80.5
127
41.7
CMCG01880
Cyanidioschyzon merolae
5.2e-14
79.0
130
44.6
ptri211210
Phaeodactylum tricornutum
1.2e-13
77.8
126
41.3
gene20520
Fragilariopsis cylindrus
3.4e-13
76.3
126
42.9
Naga_100036g8
Nannochloropsis gaditana
5.7e-13
75.5
123
39.8
emh743100
Emiliania huxleyi
2.8e-12
73.2
128
37.5
emh151120
Emiliania huxleyi
2.8e-12
73.2
128
37.5
gsu88150
Galdieria sulphuraria
2.8e-12
73.2
125
38.4
YBR146W
Saccharomyces cerevisiae strain S288C
4.8e-12
72.4
126
38.9
SPAC29A4.03c
Schizosaccharomyces pombe
1.0e-09
64.7
123
34.1
ENSG00000135972
Homo sapiens
5.0e-09
62.4
125
33.6
FBgn0037529
Drosophila melanogaster
2.5e-08
60.1
125
38.4
pte165930
Paramecium tetraurelia
3.2e-08
59.7
128
32.8
pte498440
Paramecium tetraurelia
3.2e-08
59.7
128
32.8
Cre02.g106750
Chlamydomonas reinhardtii
6.1e-07
55.5
132
32.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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