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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CM20G00980
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CM20G00980
Cyanidioschyzon merolae
0.0e+00
1966.4
998
100.0
SPBC6B1.06c
Schizosaccharomyces pombe
8.9e-71
270.4
929
26.9
Pp3c19_17130
Physcomitrella patens
1.1e-63
246.9
787
29.1
FBgn0035402
Drosophila melanogaster
2.2e-61
239.2
932
26.2
ENSG00000111667
Homo sapiens
5.4e-60
234.6
955
26.1
pte41080
Paramecium tetraurelia
2.5e-57
225.7
926
23.9
AT3G20630
Arabidopsis thaliana
4.8e-56
221.5
793
27.7
pte431210
Paramecium tetraurelia
3.4e-54
215.3
921
25.0
ENSG00000058056
Homo sapiens
3.5e-51
205.3
966
25.2
ccr105840
Chondrus crispus
6.2e-48
194.5
743
27.5
YBR058C
Saccharomyces cerevisiae strain S288C
9.7e-41
170.6
960
22.3
Sro50_g028940
Seminavis robusta
1.3e-37
160.2
834
25.3
ptri197590
Phaeodactylum tricornutum
3.8e-37
158.7
809
24.8
gene8079
Fragilariopsis cylindrus
5.0e-37
158.3
809
25.1
fso156050
Fistulifera solaris
1.9e-36
156.4
885
22.9
tps168550
Thalassiosira pseudonana
1.9e-36
156.4
798
23.9
tho66880
Thalassiosira oceanica
3.2e-36
155.6
898
24.3
fso150670
Fistulifera solaris
4.2e-36
155.2
887
23.2
ps00G46980
Pseudo-nitzschia multiseries
1.3e-34
150.2
802
25.1
CC00G02270
Cyclotella cryptica
6.7e-34
147.9
847
23.1
CC00G151470
Cyclotella cryptica
6.7e-34
147.9
847
23.1
emh700200
Emiliania huxleyi
3.2e-28
129.0
784
24.9
Cre02.g080350
Chlamydomonas reinhardtii
7.2e-28
127.9
1040
23.1
WBGene00020839
Caenorhabditis elegans
1.2e-27
127.1
728
24.0
AA0005G03970
Aureococcus anophagefferens
1.6e-27
126.7
903
23.8
Ec-15_000480
Ectocarpus siliculosus
1.1e-25
120.6
695
22.7
Naga_100086g18
Nannochloropsis gaditana
1.5e-25
120.2
955
23.4
sya00G29320
Synedra acus
2.2e-13
79.7
691
20.4
sya00G212090
Synedra acus
5.0e-13
78.6
476
21.6
PSNMU-V1.4_AUG-EV-PASAV3_0104140
Pseudo-nitzschia multistriata
3.2e-12
75.9
116
41.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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