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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CM08G01740
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CM08G01740
Cyanidioschyzon merolae
0.0e+00
1803.9
912
100.0
CC00G111870
Cyclotella cryptica
6.3e-55
217.6
675
29.5
CC00G124680
Cyclotella cryptica
6.3e-55
217.6
675
29.5
CC00G197950
Cyclotella cryptica
6.3e-55
217.6
675
29.5
fso108830
Fistulifera solaris
5.3e-54
214.5
538
31.8
fso50470
Fistulifera solaris
5.0e-52
208.0
541
31.1
ptri97390
Phaeodactylum tricornutum
5.0e-52
208.0
495
32.9
CC00G124660
Cyclotella cryptica
1.1e-51
206.8
544
31.1
ccr156360
Chondrus crispus
1.6e-50
203.0
529
31.0
Ec-24_000110
Ectocarpus siliculosus
8.0e-50
200.7
489
30.7
CC00G33820
Cyclotella cryptica
1.8e-49
199.5
472
31.1
emh724720
Emiliania huxleyi
2.3e-49
199.1
624
29.3
sya00G41010
Synedra acus
7.4e-48
194.1
647
28.7
gsu19280
Galdieria sulphuraria
2.2e-47
192.6
444
30.9
tho258620
Thalassiosira oceanica
4.1e-46
188.3
419
31.3
Sro48_g028410
Seminavis robusta
1.2e-45
186.8
498
29.5
Sro1854_g301900
Seminavis robusta
2.2e-44
182.6
460
31.7
fso187870
Fistulifera solaris
3.8e-44
181.8
525
28.6
ps00G185410
Pseudo-nitzschia multiseries
5.0e-44
181.4
441
32.2
fso114550
Fistulifera solaris
6.5e-44
181.0
492
29.7
sya00G269980
Synedra acus
6.5e-44
181.0
499
31.5
gene7260
Fragilariopsis cylindrus
1.1e-43
180.3
539
28.8
Sro1301_g260840
Seminavis robusta
1.5e-43
179.9
459
31.8
PSNMU-V1.4_AUG-EV-PASAV3_0065830
Pseudo-nitzschia multistriata
7.2e-43
177.6
505
30.3
gene12596
Fragilariopsis cylindrus
4.1e-38
161.8
470
29.4
gene12604
Fragilariopsis cylindrus
5.4e-38
161.4
553
26.2
pte195630
Paramecium tetraurelia
2.8e-26
122.5
363
28.4
gene7259
Fragilariopsis cylindrus
1.5e-24
116.7
502
25.5
FBgn0029807
Drosophila melanogaster
2.2e-07
59.7
246
24.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing