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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G86990
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G86990
Cyclotella cryptica
1.0e-235
817.0
398
100.0
tps56500
Thalassiosira pseudonana
5.4e-160
565.5
379
72.0
PSNMU-V1.4_AUG-EV-PASAV3_0028300
Pseudo-nitzschia multistriata
2.4e-112
407.1
396
55.3
Sro1358_g265910
Seminavis robusta
7.1e-112
405.6
385
54.8
ps00G122010
Pseudo-nitzschia multiseries
2.7e-111
403.7
393
54.2
fso100720
Fistulifera solaris
4.6e-111
402.9
383
54.3
gene18851
Fragilariopsis cylindrus
7.9e-111
402.1
396
53.8
fso16850
Fistulifera solaris
1.5e-109
397.9
383
54.0
ptri131370
Phaeodactylum tricornutum
9.9e-106
385.2
384
53.6
sya00G202120
Synedra acus
5.5e-104
379.4
389
53.0
tho224340
Thalassiosira oceanica
3.7e-100
366.7
351
56.1
AT5G63620
Arabidopsis thaliana
5.6e-40
166.8
397
31.0
gene12429
Fragilariopsis cylindrus
8.6e-33
142.9
130
56.2
Pp3s30_80
Physcomitrella patens
5.6e-32
140.2
365
30.7
gsu25190
Galdieria sulphuraria
6.2e-31
136.7
318
32.1
Pp3s42_290
Physcomitrella patens
6.8e-30
133.3
343
29.4
gsu134500
Galdieria sulphuraria
2.6e-29
131.3
329
30.4
YDL246C
Saccharomyces cerevisiae strain S288C
2.2e-28
128.3
352
33.2
WBGene00011003
Caenorhabditis elegans
3.7e-28
127.5
362
30.7
YJR159W
Saccharomyces cerevisiae strain S288C
3.7e-28
127.5
352
33.2
Pp3c14_11760
Physcomitrella patens
9.2e-27
122.9
357
29.1
Naga_100049g35
Nannochloropsis gaditana
1.6e-26
122.1
367
30.0
gene11363
Fragilariopsis cylindrus
2.1e-26
121.7
374
27.8
ENSG00000248144
Homo sapiens
2.7e-26
121.3
340
29.7
sya00G152490
Synedra acus
4.6e-26
120.6
327
34.3
gsu56120
Galdieria sulphuraria
1.3e-25
119.0
363
28.1
ENSG00000187758
Homo sapiens
6.6e-25
116.7
333
28.8
ENSG00000196616
Homo sapiens
8.6e-25
116.3
333
29.1
gsu43780
Galdieria sulphuraria
2.5e-24
114.8
321
30.2
YDL168W
Saccharomyces cerevisiae strain S288C
2.5e-24
114.8
385
25.5
ENSG00000140263
Homo sapiens
4.3e-24
114.0
311
32.8
Pp3s58_327
Physcomitrella patens
4.3e-24
114.0
353
27.5
sya00G178800
Synedra acus
4.3e-24
114.0
380
26.1
AT5G51970
Arabidopsis thaliana
5.6e-24
113.6
296
30.4
ENSG00000196344
Homo sapiens
5.6e-24
113.6
317
26.8
gsu50060
Galdieria sulphuraria
1.2e-23
112.5
353
25.8
Pp3c10_670
Physcomitrella patens
2.1e-23
111.7
247
33.2
WBGene00011004
Caenorhabditis elegans
2.8e-23
111.3
368
28.5
FBgn0022359
Drosophila melanogaster
3.6e-23
110.9
374
28.6
FBgn0024289
Drosophila melanogaster
4.7e-23
110.5
374
28.6
ENSG00000198099
Homo sapiens
4.7e-23
110.5
381
25.5
ENSG00000197894
Homo sapiens
6.2e-23
110.2
379
26.9
Pp3s58_340
Physcomitrella patens
6.2e-23
110.2
288
29.2
sya00G79530
Synedra acus
8.1e-23
109.8
386
26.4
SPCC13B11.01
Schizosaccharomyces pombe
1.4e-22
109.0
302
27.8
ptri92490
Phaeodactylum tricornutum
6.8e-22
106.7
352
28.4
Ec-18_002860
Ectocarpus siliculosus
8.9e-22
106.3
334
30.5
YLR070C
Saccharomyces cerevisiae strain S288C
1.2e-21
105.9
342
27.8
sya00G28710
Synedra acus
1.2e-21
105.9
376
28.5
CM01G00090
Cyanidioschyzon merolae
1.5e-21
105.5
352
27.6
SPBC1539.07c
Schizosaccharomyces pombe
1.5e-21
105.5
374
27.8
ccr126700
Chondrus crispus
4.4e-21
104.0
320
28.1
WBGene00017060
Caenorhabditis elegans
4.4e-21
104.0
237
32.1
Cre10.g431550
Chlamydomonas reinhardtii
5.8e-21
103.6
236
32.6
CM19G01250
Cyanidioschyzon merolae
9.9e-21
102.8
316
28.2
gsu49000
Galdieria sulphuraria
3.7e-20
100.9
333
27.6
ps00G188100
Pseudo-nitzschia multiseries
4.9e-20
100.5
267
29.2
SPBC1773.05c
Schizosaccharomyces pombe
6.4e-20
100.1
292
29.1
ENSG00000172955
Homo sapiens
1.1e-19
99.4
378
25.9
AT1G64710
Arabidopsis thaliana
1.9e-19
98.6
333
24.9
YMR303C
Saccharomyces cerevisiae strain S288C
1.9e-19
98.6
364
26.4
ccr185160
Chondrus crispus
2.4e-19
98.2
353
26.3
AT1G32780
Arabidopsis thaliana
4.1e-19
97.4
378
26.5
Cre12.g543400
Chlamydomonas reinhardtii
7.1e-19
96.7
328
26.8
AA0016G00240
Aureococcus anophagefferens
9.2e-19
96.3
334
26.9
AT5G42250
Arabidopsis thaliana
9.2e-19
96.3
368
25.0
Cre09.g392134
Chlamydomonas reinhardtii
1.6e-18
95.5
328
30.2
AT1G77120
Arabidopsis thaliana
2.1e-18
95.1
305
26.2
emh728220
Emiliania huxleyi
2.1e-18
95.1
360
28.1
Cre12.g543350
Chlamydomonas reinhardtii
2.7e-18
94.7
328
26.5
YBR145W
Saccharomyces cerevisiae strain S288C
2.7e-18
94.7
340
27.9
WBGene00010790
Caenorhabditis elegans
3.5e-18
94.4
294
27.9
WBGene00019240
Caenorhabditis elegans
6.0e-18
93.6
332
27.1
sya00G218260
Synedra acus
6.0e-18
93.6
360
26.1
WBGene00021747
Caenorhabditis elegans
7.8e-18
93.2
314
27.4
YMR083W
Saccharomyces cerevisiae strain S288C
1.0e-17
92.8
354
26.8
YOL086C
Saccharomyces cerevisiae strain S288C
1.0e-17
92.8
367
24.0
gsu121910
Galdieria sulphuraria
2.3e-17
91.7
286
29.4
Naga_100057g10
Nannochloropsis gaditana
2.3e-17
91.7
336
27.4
SPCC13B11.04c
Schizosaccharomyces pombe
3.9e-17
90.9
351
27.1
AT5G43940
Arabidopsis thaliana
5.1e-17
90.5
334
24.6
Pp3s42_310
Physcomitrella patens
6.6e-17
90.1
362
26.2
WBGene00010791
Caenorhabditis elegans
1.5e-16
89.0
315
27.3
tho103500
Thalassiosira oceanica
1.5e-16
89.0
368
27.2
Pp3c13_17110
Physcomitrella patens
1.9e-16
88.6
334
26.9
Pp3c17_19890
Physcomitrella patens
2.5e-16
88.2
367
24.3
tps121930
Thalassiosira pseudonana
2.5e-16
88.2
368
27.7
Pp3c1_39700
Physcomitrella patens
3.3e-16
87.8
305
27.9
Pp3c3_7430
Physcomitrella patens
4.3e-16
87.4
346
24.9
tps48270
Thalassiosira pseudonana
4.3e-16
87.4
334
27.8
AT5G24760
Arabidopsis thaliana
9.5e-16
86.3
302
26.2
emh301610
Emiliania huxleyi
9.5e-16
86.3
317
27.1
emh113560
Emiliania huxleyi
9.5e-16
86.3
317
27.1
emh135720
Emiliania huxleyi
1.2e-15
85.9
298
28.9
gene7934
Fragilariopsis cylindrus
1.6e-15
85.5
336
24.7
Sro104_g052950
Seminavis robusta
1.6e-15
85.5
334
26.0
Sro1451_g273870
Seminavis robusta
2.8e-15
84.7
355
26.5
AT4G37990
Arabidopsis thaliana
3.6e-15
84.3
290
26.9
Pp3c13_21450
Physcomitrella patens
6.2e-15
83.6
305
27.9
AT3G19450
Arabidopsis thaliana
8.1e-15
83.2
216
30.1
Ec-16_001960
Ectocarpus siliculosus
8.1e-15
83.2
270
27.0
Sro61_g035100
Seminavis robusta
8.1e-15
83.2
359
25.9
AT1G22440
Arabidopsis thaliana
1.1e-14
82.8
370
24.6
emh326200
Emiliania huxleyi
1.1e-14
82.8
299
29.4
Pp3c20_11610
Physcomitrella patens
1.1e-14
82.8
263
27.4
AA0004G01440
Aureococcus anophagefferens
1.8e-14
82.0
330
25.2
AT4G22110
Arabidopsis thaliana
1.8e-14
82.0
371
24.8
AT1G22430
Arabidopsis thaliana
2.4e-14
81.6
366
23.8
AT4G37970
Arabidopsis thaliana
2.4e-14
81.6
301
25.2
fso152240
Fistulifera solaris
4.0e-14
80.9
357
25.5
fso168150
Fistulifera solaris
4.0e-14
80.9
357
25.5
Cre07.g321700
Chlamydomonas reinhardtii
5.2e-14
80.5
379
24.3
fso111780
Fistulifera solaris
6.8e-14
80.1
229
29.3
fso176390
Fistulifera solaris
6.8e-14
80.1
302
25.5
YAL060W
Saccharomyces cerevisiae strain S288C
8.9e-14
79.7
377
24.1
AT4G37980
Arabidopsis thaliana
1.2e-13
79.3
261
28.4
CC00G166050
Cyclotella cryptica
2.0e-13
78.6
318
27.4
AT4G34230
Arabidopsis thaliana
2.6e-13
78.2
328
27.1
sya00G115680
Synedra acus
3.4e-13
77.8
351
23.1
pte406360
Paramecium tetraurelia
4.4e-13
77.4
293
27.0
pte591340
Paramecium tetraurelia
4.4e-13
77.4
290
27.6
sya00G251030
Synedra acus
4.4e-13
77.4
190
31.6
Pp3c17_20120
Physcomitrella patens
5.8e-13
77.0
232
28.9
Cre03.g207550
Chlamydomonas reinhardtii
9.9e-13
76.3
302
26.2
pte44710
Paramecium tetraurelia
9.9e-13
76.3
290
27.2
Cre03.g207800
Chlamydomonas reinhardtii
1.3e-12
75.9
304
26.3
Pp3c19_23170
Physcomitrella patens
1.3e-12
75.9
356
24.2
Pp3c14_4770
Physcomitrella patens
1.7e-12
75.5
324
25.6
Sro989_g228490
Seminavis robusta
1.7e-12
75.5
221
29.4
AT3G56460
Arabidopsis thaliana
2.9e-12
74.7
256
26.6
Naga_100041g29
Nannochloropsis gaditana
2.9e-12
74.7
336
24.1
SPBC1198.01
Schizosaccharomyces pombe
6.4e-12
73.6
285
27.4
gene11727
Fragilariopsis cylindrus
8.4e-12
73.2
345
24.1
ptri42350
Phaeodactylum tricornutum
2.4e-11
71.6
231
29.4
ccr174000
Chondrus crispus
7.1e-11
70.1
227
29.5
YAL061W
Saccharomyces cerevisiae strain S288C
9.2e-11
69.7
390
23.8
gene11701
Fragilariopsis cylindrus
1.6e-10
68.9
200
30.0
gsu29890
Galdieria sulphuraria
1.0e-09
66.2
182
29.1
Pp3c3_23630
Physcomitrella patens
1.7e-09
65.5
298
25.8
Pp3c3_23550
Physcomitrella patens
1.7e-09
65.5
298
25.8
Sro908_g218880
Seminavis robusta
1.7e-09
65.5
211
28.9
Sro1753_g295430
Seminavis robusta
2.3e-09
65.1
135
33.3
ccr102960
Chondrus crispus
3.9e-09
64.3
364
25.5
Sro2721_g335490
Seminavis robusta
3.9e-09
64.3
211
31.3
Pp3c2_13920
Physcomitrella patens
6.6e-09
63.5
248
24.2
AA0002G02640
Aureococcus anophagefferens
1.5e-08
62.4
211
27.5
Pp3c9_1500
Physcomitrella patens
1.9e-08
62.0
215
29.3
ps00G40910
Pseudo-nitzschia multiseries
2.5e-08
61.6
365
22.5
sya00G107430
Synedra acus
2.5e-08
61.6
94
36.2
Pp3c17_7890
Physcomitrella patens
4.3e-08
60.8
240
27.9
Pp3c15_2540
Physcomitrella patens
4.3e-08
60.8
276
28.6
AT1G23740
Arabidopsis thaliana
5.6e-08
60.5
227
25.6
Pp3c26_10280
Physcomitrella patens
5.6e-08
60.5
206
30.6
Cre16.g674050
Chlamydomonas reinhardtii
9.6e-08
59.7
290
26.2
PSNMU-V1.4_AUG-EV-PASAV3_0048120
Pseudo-nitzschia multistriata
9.6e-08
59.7
356
24.4
AA0014G01250
Aureococcus anophagefferens
1.2e-07
59.3
260
27.3
Pp3c3_27500
Physcomitrella patens
1.2e-07
59.3
184
28.3
emh194100
Emiliania huxleyi
2.1e-07
58.5
188
26.6
gsu130820
Galdieria sulphuraria
4.7e-07
57.4
237
26.2
gsu130840
Galdieria sulphuraria
4.7e-07
57.4
237
26.2
Sro1688_g291250
Seminavis robusta
6.2e-07
57.0
184
28.3
Pp3c16_1190
Physcomitrella patens
1.1e-06
56.2
393
23.4
WBGene00009554
Caenorhabditis elegans
1.4e-06
55.8
241
27.4
Sro673_g185190
Seminavis robusta
1.8e-06
55.5
83
30.1
Pp3c7_23980
Physcomitrella patens
3.1e-06
54.7
218
28.4
Pp3c3_23410
Physcomitrella patens
4.0e-06
54.3
171
30.4
FBgn0038762
Drosophila melanogaster
6.9e-06
53.5
83
33.7
Pp3c2_37490
Physcomitrella patens
6.9e-06
53.5
215
27.0
Pp3c2_37350
Physcomitrella patens
6.9e-06
53.5
215
27.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (6 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (8 genes)
Saccharomyces cerevisiae strain S288C (10 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (18 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (10 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (10 genes)
Synedra acus (9 genes)
Physcomitrella patens (29 genes)
Chlamydomonas reinhardtii (8 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing