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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G86310
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G86310
Cyclotella cryptica
0.0e+00
2832.0
1455
100.0
tho130360
Thalassiosira oceanica
1.2e-260
901.7
1175
45.8
tps36120
Thalassiosira pseudonana
9.8e-244
845.5
919
53.1
sya00G64220
Synedra acus
2.6e-151
538.5
1165
33.7
ptri223040
Phaeodactylum tricornutum
1.2e-137
493.0
915
36.9
Sro229_g093020
Seminavis robusta
3.3e-114
415.2
1222
29.4
PSNMU-V1.4_AUG-EV-PASAV3_0011550
Pseudo-nitzschia multistriata
2.1e-108
396.0
917
32.8
ps00G32870
Pseudo-nitzschia multiseries
5.1e-107
391.3
936
31.6
fso154520
Fistulifera solaris
3.2e-85
318.9
869
30.1
fso187590
Fistulifera solaris
9.4e-69
264.2
962
27.5
Ec-06_002280
Ectocarpus siliculosus
1.4e-67
260.4
640
33.1
Naga_100098g22
Nannochloropsis gaditana
9.7e-50
201.1
594
28.3
tps36100
Thalassiosira pseudonana
1.3e-33
147.5
80
80.0
ccr18580
Chondrus crispus
5.7e-26
122.1
474
26.2
CM17G02860
Cyanidioschyzon merolae
7.0e-24
115.2
565
24.4
gsu132540
Galdieria sulphuraria
1.6e-20
104.0
230
32.2
gene19792
Fragilariopsis cylindrus
2.7e-15
86.7
87
44.8
emh513350
Emiliania huxleyi
5.0e-14
82.4
197
35.0
emh655730
Emiliania huxleyi
2.7e-07
60.1
104
35.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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