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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G58150
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G58150
Cyclotella cryptica
4.3e-303
1041.2
514
100.0
tps186040
Thalassiosira pseudonana
1.3e-190
667.5
438
76.9
tho50420
Thalassiosira oceanica
4.6e-180
632.5
451
70.1
Sro323_g117190
Seminavis robusta
1.6e-148
527.7
498
57.4
sya00G74210
Synedra acus
2.6e-138
493.8
448
59.2
ptri91550
Phaeodactylum tricornutum
1.7e-137
491.1
492
55.5
ptri91570
Phaeodactylum tricornutum
1.7e-137
491.1
492
55.5
fso26220
Fistulifera solaris
1.3e-129
464.9
443
56.2
fso147440
Fistulifera solaris
1.4e-128
461.5
503
51.9
PSNMU-V1.4_AUG-EV-PASAV3_0064400
Pseudo-nitzschia multistriata
7.7e-127
455.7
443
56.2
ps00G62040
Pseudo-nitzschia multiseries
1.8e-123
444.5
447
55.0
AA0006G04190
Aureococcus anophagefferens
3.6e-84
313.9
433
43.6
Naga_100092g5
Nannochloropsis gaditana
6.2e-84
313.2
427
42.9
Ec-26_002880
Ectocarpus siliculosus
9.0e-83
309.3
443
42.9
Ec-26_002980
Ectocarpus siliculosus
3.9e-78
293.9
434
41.2
Ec-20_002530
Ectocarpus siliculosus
2.8e-76
287.7
424
42.7
Sro3104_g343830
Seminavis robusta
2.0e-74
281.6
251
59.8
gsu67990
Galdieria sulphuraria
1.3e-73
278.9
450
41.1
AA0016G01990
Aureococcus anophagefferens
3.2e-72
274.2
435
41.4
CM09G02710
Cyanidioschyzon merolae
5.1e-70
266.9
459
38.3
ccr100120
Chondrus crispus
4.3e-69
263.8
491
39.1
AA0003G04170
Aureococcus anophagefferens
1.2e-66
255.8
441
38.8
AT4G31780
Arabidopsis thaliana
7.6e-66
253.1
439
37.4
Pp3c19_16330
Physcomitrella patens
2.9e-65
251.1
437
36.4
emh719300
Emiliania huxleyi
8.4e-65
249.6
440
38.9
Pp3c18_19440
Physcomitrella patens
1.4e-64
248.8
452
35.6
ccr147740
Chondrus crispus
2.4e-64
248.1
427
38.4
AT2G11810
Arabidopsis thaliana
4.2e-64
247.3
437
36.2
AT5G20410
Arabidopsis thaliana
8.2e-60
233.0
444
35.4
ps00G156440
Pseudo-nitzschia multiseries
2.4e-59
231.5
450
36.7
Cre13.g585301
Chlamydomonas reinhardtii
3.4e-58
227.6
456
35.5
gene17068
Fragilariopsis cylindrus
1.1e-56
222.6
467
36.0
gene14282
Fragilariopsis cylindrus
2.5e-56
221.5
446
35.4
ps00G159700
Pseudo-nitzschia multiseries
4.2e-56
220.7
479
33.6
PSNMU-V1.4_AUG-EV-PASAV3_0038880
Pseudo-nitzschia multistriata
1.3e-54
215.7
477
33.3
tps18850
Thalassiosira pseudonana
1.3e-52
209.1
447
34.9
CC00G64290
Cyclotella cryptica
2.0e-50
201.8
494
31.6
CC00G108470
Cyclotella cryptica
2.0e-50
201.8
494
31.6
Sro26_g017720
Seminavis robusta
2.0e-50
201.8
505
32.9
tps32700
Thalassiosira pseudonana
2.6e-50
201.4
430
35.6
ccr100180
Chondrus crispus
4.5e-50
200.7
344
37.2
ptri188190
Phaeodactylum tricornutum
5.9e-50
200.3
510
31.8
emh309700
Emiliania huxleyi
1.3e-49
199.1
481
34.7
emh136760
Emiliania huxleyi
2.9e-49
198.0
422
33.9
fso02320
Fistulifera solaris
1.4e-48
195.7
541
31.1
tho91700
Thalassiosira oceanica
3.2e-48
194.5
499
31.1
sya00G41090
Synedra acus
2.1e-47
191.8
488
31.8
fso17790
Fistulifera solaris
3.6e-47
191.0
485
31.5
fso156950
Fistulifera solaris
4.6e-47
190.7
549
30.1
sya00G41070
Synedra acus
6.1e-47
190.3
491
31.2
fso38270
Fistulifera solaris
2.5e-45
184.9
476
31.1
Sro1298_g260560
Seminavis robusta
1.3e-44
182.6
591
28.4
ptri225580
Phaeodactylum tricornutum
1.5e-42
175.6
556
29.5
sya00G41130
Synedra acus
4.7e-39
164.1
534
27.9
CC00G78760
Cyclotella cryptica
3.5e-34
147.9
611
26.4
tho273820
Thalassiosira oceanica
3.2e-32
141.4
654
25.4
ccr106560
Chondrus crispus
3.6e-07
58.2
125
32.8
gsu18050
Galdieria sulphuraria
3.0e-06
55.1
112
31.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing