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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G20910
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G20910
Cyclotella cryptica
0.0e+00
1750.3
878
100.0
CC00G131440
Cyclotella cryptica
1.9e-181
637.9
482
69.9
CC00G109430
Cyclotella cryptica
1.7e-150
535.0
382
72.5
CC00G31060
Cyclotella cryptica
3.9e-118
427.6
397
58.9
CC00G74460
Cyclotella cryptica
1.2e-111
406.0
283
72.8
CC00G81110
Cyclotella cryptica
1.8e-107
392.1
220
88.2
CC00G95370
Cyclotella cryptica
2.0e-90
335.5
188
89.9
CC00G100670
Cyclotella cryptica
1.9e-88
328.9
215
76.3
sya00G103790
Synedra acus
4.1e-59
231.5
412
37.6
CC00G16360
Cyclotella cryptica
1.4e-56
223.0
180
59.4
sya00G245830
Synedra acus
6.1e-55
217.6
398
36.7
sya00G62270
Synedra acus
5.1e-54
214.5
659
27.5
CC00G170920
Cyclotella cryptica
2.8e-52
208.8
188
55.3
sya00G191580
Synedra acus
5.9e-50
201.1
409
35.0
CC00G176370
Cyclotella cryptica
1.2e-47
193.4
118
80.5
sya00G221970
Synedra acus
6.3e-44
181.0
880
24.5
PSNMU-V1.4_AUG-EV-PASAV3_0001900
Pseudo-nitzschia multistriata
7.7e-42
174.1
498
29.7
CC00G36700
Cyclotella cryptica
6.5e-41
171.0
134
59.7
CC00G133980
Cyclotella cryptica
1.9e-40
169.5
202
42.6
CC00G67460
Cyclotella cryptica
3.9e-38
161.8
129
59.7
CC00G124060
Cyclotella cryptica
3.9e-38
161.8
92
84.8
sya00G238580
Synedra acus
8.8e-38
160.6
207
42.5
PSNMU-V1.4_AUG-EV-PASAV3_0011870
Pseudo-nitzschia multistriata
2.0e-37
159.5
497
27.8
sya00G246540
Synedra acus
4.4e-37
158.3
351
31.1
CC00G170910
Cyclotella cryptica
5.7e-37
157.9
476
29.6
sya00G212950
Synedra acus
4.1e-35
151.8
206
37.9
PSNMU-V1.4_AUG-EV-PASAV3_0006560
Pseudo-nitzschia multistriata
2.0e-34
149.4
494
27.5
sya00G79880
Synedra acus
6.5e-33
144.4
149
48.3
sya00G93160
Synedra acus
3.2e-32
142.1
207
40.1
sya00G93260
Synedra acus
3.2e-32
142.1
207
40.1
sya00G93190
Synedra acus
4.2e-32
141.7
207
40.1
CC00G13030
Cyclotella cryptica
1.6e-31
139.8
307
30.6
Sro4424_g353970
Seminavis robusta
4.7e-31
138.3
295
33.6
CC00G202760
Cyclotella cryptica
1.8e-30
136.3
184
42.9
sya00G197450
Synedra acus
4.4e-29
131.7
334
32.0
sya00G207820
Synedra acus
2.8e-28
129.0
144
41.0
sya00G210010
Synedra acus
4.8e-28
128.3
159
42.1
sya00G57360
Synedra acus
3.1e-27
125.6
132
46.2
sya00G03650
Synedra acus
3.5e-26
122.1
127
48.8
fso163300
Fistulifera solaris
4.5e-26
121.7
435
29.4
sya00G34780
Synedra acus
1.0e-25
120.6
372
29.3
sya00G76460
Synedra acus
1.0e-25
120.6
261
36.0
sya00G99530
Synedra acus
6.5e-25
117.9
295
31.9
CC00G208740
Cyclotella cryptica
1.9e-24
116.3
256
31.2
sya00G102460
Synedra acus
2.5e-24
115.9
134
45.5
sya00G59300
Synedra acus
9.4e-24
114.0
163
38.0
sya00G186020
Synedra acus
2.7e-23
112.5
237
34.2
CC00G135070
Cyclotella cryptica
6.1e-23
111.3
252
29.0
sya00G257750
Synedra acus
6.1e-23
111.3
342
26.6
CC00G89920
Cyclotella cryptica
8.0e-23
110.9
162
40.1
sya00G14210
Synedra acus
1.4e-22
110.2
272
31.6
sya00G181920
Synedra acus
4.0e-22
108.6
135
40.7
sya00G59780
Synedra acus
5.2e-22
108.2
377
28.1
sya00G59140
Synedra acus
5.7e-21
104.8
132
40.9
CC00G169500
Cyclotella cryptica
7.5e-21
104.4
134
39.6
sya00G209520
Synedra acus
1.3e-20
103.6
156
37.8
sya00G158680
Synedra acus
2.2e-20
102.8
164
37.2
sya00G65920
Synedra acus
2.8e-20
102.4
153
37.9
sya00G40830
Synedra acus
3.7e-20
102.1
481
23.5
sya00G20260
Synedra acus
4.8e-20
101.7
110
50.9
sya00G62110
Synedra acus
4.8e-20
101.7
287
29.3
sya00G236900
Synedra acus
4.8e-20
101.7
134
43.3
sya00G225690
Synedra acus
8.3e-20
100.9
497
24.5
sya00G170070
Synedra acus
1.8e-19
99.8
279
31.9
fso79470
Fistulifera solaris
2.4e-19
99.4
431
27.8
sya00G05190
Synedra acus
2.4e-19
99.4
339
28.6
sya00G253490
Synedra acus
4.1e-19
98.6
107
44.9
sya00G185780
Synedra acus
7.0e-19
97.8
133
42.1
sya00G51030
Synedra acus
2.0e-18
96.3
830
21.4
sya00G165500
Synedra acus
2.7e-18
95.9
96
49.0
ps00G149740
Pseudo-nitzschia multiseries
1.0e-17
94.0
418
26.1
sya00G236000
Synedra acus
8.5e-17
90.9
168
35.7
sya00G225640
Synedra acus
2.5e-16
89.4
184
35.3
sya00G125370
Synedra acus
4.2e-16
88.6
133
40.6
sya00G49700
Synedra acus
5.5e-16
88.2
482
24.7
sya00G165470
Synedra acus
5.5e-16
88.2
221
33.5
sya00G201100
Synedra acus
5.5e-16
88.2
379
27.2
sya00G265780
Synedra acus
1.2e-15
87.0
297
28.3
sya00G103640
Synedra acus
1.6e-15
86.7
197
34.5
sya00G92690
Synedra acus
2.1e-15
86.3
88
48.9
sya00G122890
Synedra acus
3.6e-15
85.5
116
41.4
CC00G55650
Cyclotella cryptica
8.0e-15
84.3
68
57.4
sya00G156700
Synedra acus
1.8e-14
83.2
86
46.5
sya00G89340
Synedra acus
2.3e-14
82.8
193
34.7
sya00G188010
Synedra acus
2.3e-14
82.8
426
27.0
sya00G267590
Synedra acus
2.3e-14
82.8
210
30.0
sya00G213310
Synedra acus
3.0e-14
82.4
222
31.1
sya00G49780
Synedra acus
4.0e-14
82.0
109
41.3
sya00G153070
Synedra acus
1.5e-13
80.1
360
25.6
sya00G197540
Synedra acus
1.5e-13
80.1
360
25.6
ps00G177220
Pseudo-nitzschia multiseries
2.0e-13
79.7
203
29.6
sya00G32780
Synedra acus
2.0e-13
79.7
396
23.2
sya00G114010
Synedra acus
3.4e-13
79.0
373
25.7
sya00G248190
Synedra acus
3.4e-13
79.0
99
38.4
sya00G180660
Synedra acus
5.7e-13
78.2
91
41.8
sya00G241510
Synedra acus
9.8e-13
77.4
209
29.7
sya00G271160
Synedra acus
9.8e-13
77.4
116
37.1
sya00G146680
Synedra acus
2.2e-12
76.3
93
45.2
Sro3797_g351120
Seminavis robusta
3.7e-12
75.5
233
28.3
ps00G36710
Pseudo-nitzschia multiseries
6.3e-12
74.7
246
27.6
ps00G26680
Pseudo-nitzschia multiseries
8.3e-12
74.3
323
25.4
Sro882_g215390
Seminavis robusta
1.8e-11
73.2
297
27.6
sya00G140740
Synedra acus
3.1e-11
72.4
111
41.4
sya00G145620
Synedra acus
3.1e-11
72.4
141
35.5
sya00G03850
Synedra acus
4.1e-11
72.0
122
36.9
sya00G145290
Synedra acus
7.0e-11
71.2
375
25.6
sya00G214840
Synedra acus
9.2e-11
70.9
80
43.8
ps00G108840
Pseudo-nitzschia multiseries
1.2e-10
70.5
265
24.5
sya00G132220
Synedra acus
1.2e-10
70.5
134
35.1
sya00G161340
Synedra acus
2.0e-10
69.7
178
31.5
sya00G225580
Synedra acus
2.0e-10
69.7
105
39.0
sya00G41210
Synedra acus
7.8e-10
67.8
121
33.9
sya00G128100
Synedra acus
1.0e-09
67.4
491
23.0
sya00G177030
Synedra acus
1.3e-09
67.0
243
25.5
sya00G151540
Synedra acus
2.3e-09
66.2
90
37.8
sya00G224090
Synedra acus
2.3e-09
66.2
349
22.1
ccr162000
Chondrus crispus
2.9e-09
65.9
164
36.0
sya00G94790
Synedra acus
2.9e-09
65.9
136
30.9
sya00G166450
Synedra acus
2.9e-09
65.9
188
30.3
ccr12640
Chondrus crispus
5.0e-09
65.1
142
37.3
sya00G59310
Synedra acus
5.0e-09
65.1
478
20.7
sya00G187260
Synedra acus
5.0e-09
65.1
378
24.1
sya00G93410
Synedra acus
6.6e-09
64.7
308
23.1
sya00G164000
Synedra acus
6.6e-09
64.7
382
24.9
sya00G180670
Synedra acus
6.6e-09
64.7
628
21.5
sya00G75970
Synedra acus
1.1e-08
63.9
106
35.8
fso181140
Fistulifera solaris
1.9e-08
63.2
141
30.5
sya00G133150
Synedra acus
1.9e-08
63.2
89
42.7
ps00G37510
Pseudo-nitzschia multiseries
3.3e-08
62.4
215
24.7
sya00G36010
Synedra acus
3.3e-08
62.4
483
23.8
sya00G145630
Synedra acus
4.3e-08
62.0
144
29.9
sya00G216810
Synedra acus
4.3e-08
62.0
353
23.8
sya00G225180
Synedra acus
5.6e-08
61.6
83
44.6
sya00G165360
Synedra acus
7.3e-08
61.2
66
45.5
sya00G93590
Synedra acus
9.5e-08
60.8
243
26.7
sya00G170080
Synedra acus
1.2e-07
60.5
185
29.2
sya00G271180
Synedra acus
1.2e-07
60.5
339
21.5
CC00G69170
Cyclotella cryptica
1.6e-07
60.1
128
37.5
sya00G03630
Synedra acus
1.6e-07
60.1
283
25.8
sya00G249530
Synedra acus
1.6e-07
60.1
121
28.9
ps00G77430
Pseudo-nitzschia multiseries
2.1e-07
59.7
179
27.4
sya00G137990
Synedra acus
2.8e-07
59.3
75
44.0
sya00G251280
Synedra acus
2.8e-07
59.3
106
34.0
sya00G26100
Synedra acus
3.6e-07
58.9
62
41.9
sya00G89040
Synedra acus
3.6e-07
58.9
440
21.4
sya00G35470
Synedra acus
4.7e-07
58.5
326
21.8
sya00G76470
Synedra acus
4.7e-07
58.5
226
26.1
sya00G158080
Synedra acus
4.7e-07
58.5
210
29.0
fso200810
Fistulifera solaris
6.1e-07
58.2
121
34.7
sya00G33920
Synedra acus
6.1e-07
58.2
298
25.8
sya00G144390
Synedra acus
6.1e-07
58.2
138
26.8
sya00G132550
Synedra acus
8.0e-07
57.8
157
31.2
sya00G135050
Synedra acus
8.0e-07
57.8
120
34.2
sya00G60910
Synedra acus
1.0e-06
57.4
35
57.1
sya00G113040
Synedra acus
1.0e-06
57.4
250
24.4
sya00G228560
Synedra acus
1.0e-06
57.4
138
32.6
sya00G251150
Synedra acus
1.0e-06
57.4
167
23.4
sya00G30000
Synedra acus
1.4e-06
57.0
241
24.9
sya00G41760
Synedra acus
1.8e-06
56.6
452
21.9
sya00G139000
Synedra acus
1.8e-06
56.6
161
22.4
sya00G93580
Synedra acus
2.3e-06
56.2
78
42.3
sya00G176780
Synedra acus
2.3e-06
56.2
278
25.2
ps00G10140
Pseudo-nitzschia multiseries
3.0e-06
55.8
97
33.0
sya00G107800
Synedra acus
3.0e-06
55.8
407
22.1
sya00G150150
Synedra acus
3.0e-06
55.8
138
29.7
sya00G160590
Synedra acus
4.0e-06
55.5
136
25.7
sya00G249900
Synedra acus
4.0e-06
55.5
223
26.5
sya00G269950
Synedra acus
4.0e-06
55.5
395
20.5
sya00G227800
Synedra acus
6.8e-06
54.7
121
32.2
sya00G235450
Synedra acus
8.9e-06
54.3
297
24.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (8 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (24 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (126 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing