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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G205450
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G205450
Cyclotella cryptica
0.0e+00
2397.9
1322
100.0
CC00G67280
Cyclotella cryptica
0.0e+00
1964.1
1321
82.4
CC00G139280
Cyclotella cryptica
0.0e+00
1961.4
1321
77.4
CC00G110590
Cyclotella cryptica
0.0e+00
1951.0
1322
75.9
CC00G183890
Cyclotella cryptica
0.0e+00
1809.3
1350
71.3
CC00G168030
Cyclotella cryptica
0.0e+00
1207.2
1164
63.1
CC00G177980
Cyclotella cryptica
0.0e+00
1134.0
1350
48.0
CC00G87580
Cyclotella cryptica
0.0e+00
1100.5
1267
52.1
CC00G28500
Cyclotella cryptica
0.0e+00
1097.4
1024
55.7
tho02320
Thalassiosira oceanica
2.0e-307
1057.0
1004
53.7
tho146100
Thalassiosira oceanica
4.1e-289
996.1
1014
52.2
tho225040
Thalassiosira oceanica
4.5e-195
683.7
1091
39.0
tho24160
Thalassiosira oceanica
3.8e-186
654.1
1119
37.2
tho15640
Thalassiosira oceanica
4.2e-185
650.6
1051
38.2
CC00G84140
Cyclotella cryptica
3.3e-174
614.4
324
92.6
tho269800
Thalassiosira oceanica
8.8e-167
589.7
808
42.1
tho113620
Thalassiosira oceanica
3.8e-162
574.3
804
40.3
tho54340
Thalassiosira oceanica
5.8e-118
427.6
667
39.7
CC00G110470
Cyclotella cryptica
1.1e-116
423.3
227
90.3
tho400500
Thalassiosira oceanica
2.4e-103
379.0
622
37.5
tho31100
Thalassiosira oceanica
2.4e-79
299.3
473
40.2
tho207000
Thalassiosira oceanica
3.7e-72
275.4
256
55.1
tps233970
Thalassiosira pseudonana
2.4e-71
272.7
385
40.5
Sro1223_g253920
Seminavis robusta
5.9e-70
268.1
686
29.0
CC00G178120
Cyclotella cryptica
3.5e-62
242.3
290
46.9
tho11860
Thalassiosira oceanica
2.2e-48
196.4
311
38.6
tps36400
Thalassiosira pseudonana
3.1e-39
166.0
458
28.8
tho402200
Thalassiosira oceanica
1.3e-37
160.6
115
65.2
CC00G119970
Cyclotella cryptica
1.7e-29
133.7
136
50.0
Sro1294_g260160
Seminavis robusta
4.9e-24
115.5
325
28.6
tho235600
Thalassiosira oceanica
1.1e-23
114.4
152
44.1
tho201080
Thalassiosira oceanica
3.9e-21
105.9
130
42.3
tho421640
Thalassiosira oceanica
1.1e-20
104.4
156
41.7
tho69720
Thalassiosira oceanica
5.6e-20
102.1
84
54.8
gene16553
Fragilariopsis cylindrus
3.6e-19
99.4
338
27.5
CC00G141300
Cyclotella cryptica
1.5e-17
94.0
239
29.7
tho269740
Thalassiosira oceanica
1.3e-16
90.9
88
47.7
tho111660
Thalassiosira oceanica
7.3e-12
75.1
145
32.4
tho293920
Thalassiosira oceanica
7.3e-12
75.1
145
33.1
tho338540
Thalassiosira oceanica
9.5e-12
74.7
145
32.4
tho56660
Thalassiosira oceanica
1.2e-11
74.3
145
32.4
fso11910
Fistulifera solaris
8.1e-11
71.6
195
26.7
gene3576
Fragilariopsis cylindrus
1.4e-10
70.9
308
25.3
tho94400
Thalassiosira oceanica
1.4e-10
70.9
211
26.5
ccr162020
Chondrus crispus
1.8e-10
70.5
199
28.1
ccr162420
Chondrus crispus
1.8e-10
70.5
199
28.1
fso11860
Fistulifera solaris
3.1e-10
69.7
195
27.2
fso200830
Fistulifera solaris
5.2e-10
68.9
195
27.2
fso06610
Fistulifera solaris
8.9e-10
68.2
674
21.2
fso174580
Fistulifera solaris
8.9e-10
68.2
167
28.7
fso121990
Fistulifera solaris
1.2e-09
67.8
207
25.1
Naga_100533g2
Nannochloropsis gaditana
1.2e-09
67.8
137
31.4
fso181140
Fistulifera solaris
1.5e-09
67.4
131
31.3
Sro1780_g078321
Seminavis robusta
1.5e-09
67.4
212
24.1
tho64380
Thalassiosira oceanica
1.5e-09
67.4
135
31.9
CC00G30360
Cyclotella cryptica
2.0e-09
67.0
238
26.1
tho385140
Thalassiosira oceanica
2.0e-09
67.0
142
31.0
gene3082
Fragilariopsis cylindrus
4.4e-09
65.9
137
35.0
tho105160
Thalassiosira oceanica
4.4e-09
65.9
135
31.1
tho131480
Thalassiosira oceanica
4.4e-09
65.9
134
31.3
tho197380
Thalassiosira oceanica
4.4e-09
65.9
135
31.1
tho643920
Thalassiosira oceanica
4.4e-09
65.9
181
31.5
tho16720
Thalassiosira oceanica
7.6e-09
65.1
136
32.4
ccr162000
Chondrus crispus
9.9e-09
64.7
213
24.9
gene2515
Fragilariopsis cylindrus
1.7e-08
63.9
120
35.0
tho20420
Thalassiosira oceanica
1.7e-08
63.9
209
27.8
tho83920
Thalassiosira oceanica
1.7e-08
63.9
136
31.6
tho219020
Thalassiosira oceanica
1.7e-08
63.9
130
33.1
CC00G87590
Cyclotella cryptica
2.2e-08
63.5
63
50.8
Pp3c19_10880
Physcomitrella patens
4.9e-08
62.4
221
25.8
AT4G23160
Arabidopsis thaliana
6.4e-08
62.0
214
27.1
CC00G170210
Cyclotella cryptica
1.1e-07
61.2
168
28.6
Sro1693_g291681
Seminavis robusta
1.1e-07
61.2
93
35.5
CC00G06130
Cyclotella cryptica
1.4e-07
60.8
182
27.5
fso38500
Fistulifera solaris
1.9e-07
60.5
215
24.7
ccr12540
Chondrus crispus
2.4e-07
60.1
148
29.7
ccr12560
Chondrus crispus
2.4e-07
60.1
148
29.7
ccr12580
Chondrus crispus
2.4e-07
60.1
148
29.7
ccr12600
Chondrus crispus
2.4e-07
60.1
148
29.7
tho123740
Thalassiosira oceanica
3.2e-07
59.7
130
31.5
CC00G100660
Cyclotella cryptica
7.1e-07
58.5
170
27.1
ps00G73000
Pseudo-nitzschia multiseries
9.2e-07
58.2
181
32.6
tho78180
Thalassiosira oceanica
2.1e-06
57.0
136
27.2
Cre03.g186800
Chlamydomonas reinhardtii
3.5e-06
56.2
179
26.3
Cre01.g045850
Chlamydomonas reinhardtii
3.5e-06
56.2
179
26.3
Cre16.g673450
Chlamydomonas reinhardtii
3.5e-06
56.2
179
26.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (35 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (19 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (7 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing