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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G20510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G20510
Cyclotella cryptica
1.9e-244
846.7
622
100.0
tps148590
Thalassiosira pseudonana
1.6e-89
332.0
541
40.9
ps00G22710
Pseudo-nitzschia multiseries
8.6e-64
246.5
436
47.5
tho25000
Thalassiosira oceanica
1.9e-63
245.4
514
41.1
fso59210
Fistulifera solaris
1.1e-61
239.6
453
42.2
ptri104680
Phaeodactylum tricornutum
1.4e-61
239.2
445
41.1
fso144430
Fistulifera solaris
1.8e-61
238.8
443
42.9
Sro59_g034220
Seminavis robusta
1.2e-60
236.1
227
58.6
sya00G126590
Synedra acus
4.9e-59
230.7
256
51.2
PSNMU-V1.4_AUG-EV-PASAV3_0009360
Pseudo-nitzschia multistriata
9.2e-58
226.5
247
60.7
gene18296
Fragilariopsis cylindrus
3.4e-44
181.4
133
70.7
Ec-02_000660
Ectocarpus siliculosus
5.4e-42
174.1
226
45.1
Naga_100170g9
Nannochloropsis gaditana
3.5e-41
171.4
184
50.5
Pp3c11_24710
Physcomitrella patens
6.4e-35
150.6
139
51.8
Pp3c7_10890
Physcomitrella patens
6.4e-35
150.6
139
51.8
Cre09.g386731
Chlamydomonas reinhardtii
5.5e-34
147.5
161
50.3
AT5G51300
Arabidopsis thaliana
1.6e-33
146.0
163
48.5
Cre12.g553750
Chlamydomonas reinhardtii
1.9e-31
139.0
144
52.1
Pp3c20_6220
Physcomitrella patens
2.8e-30
135.2
142
49.3
FBgn0025571
Drosophila melanogaster
1.4e-29
132.9
231
37.7
gsu82300
Galdieria sulphuraria
9.0e-29
130.2
185
40.0
SPCC962.06c
Schizosaccharomyces pombe
7.6e-28
127.1
168
40.5
YLR116W
Saccharomyces cerevisiae strain S288C
7.1e-26
120.6
154
40.3
WBGene00013808
Caenorhabditis elegans
3.0e-24
115.2
141
42.6
ccr173500
Chondrus crispus
6.7e-24
114.0
170
41.2
Pp3c17_23570
Physcomitrella patens
3.3e-23
111.7
126
46.0
AT4G26480
Arabidopsis thaliana
2.1e-22
109.0
143
39.2
ENSG00000168066
Homo sapiens
2.8e-22
108.6
235
34.5
Pp3c14_26290
Physcomitrella patens
2.8e-22
108.6
138
42.0
AT5G56140
Arabidopsis thaliana
3.7e-22
108.2
126
41.3
Pp3c2_300
Physcomitrella patens
3.7e-22
108.2
138
41.3
AT1G09660
Arabidopsis thaliana
8.2e-22
107.1
139
41.7
CM01G00750
Cyanidioschyzon merolae
5.3e-21
104.4
127
39.4
gsu12660
Galdieria sulphuraria
2.6e-20
102.1
125
41.6
WBGene00006423
Caenorhabditis elegans
1.7e-19
99.4
125
43.2
AT3G08620
Arabidopsis thaliana
2.9e-19
98.6
138
36.2
ENSG00000112531
Homo sapiens
1.9e-18
95.9
123
42.3
AT2G38610
Arabidopsis thaliana
5.5e-18
94.4
132
36.4
FBgn0264491
Drosophila melanogaster
3.6e-17
91.7
123
39.8
WBGene00001595
Caenorhabditis elegans
1.3e-16
89.7
121
38.8
WBGene00019509
Caenorhabditis elegans
1.5e-15
86.3
123
43.1
AA0009G02850
Aureococcus anophagefferens
1.9e-15
85.9
115
40.0
Ec-12_007740
Ectocarpus siliculosus
2.4e-13
79.0
130
40.8
WBGene00022101
Caenorhabditis elegans
9.1e-13
77.0
130
34.6
CM09G02920
Cyanidioschyzon merolae
9.1e-13
77.0
144
36.8
tho38580
Thalassiosira oceanica
9.1e-13
77.0
98
45.9
emh524080
Emiliania huxleyi
1.2e-12
76.6
104
39.4
emh189880
Emiliania huxleyi
1.2e-12
76.6
104
39.4
ENSG00000112232
Homo sapiens
3.4e-12
75.1
125
35.2
pte328100
Paramecium tetraurelia
4.5e-12
74.7
156
31.4
pte361310
Paramecium tetraurelia
4.5e-12
74.7
156
31.4
pte604530
Paramecium tetraurelia
1.0e-11
73.6
115
36.5
pte670710
Paramecium tetraurelia
1.0e-11
73.6
115
36.5
WBGene00044674
Caenorhabditis elegans
4.2e-10
68.2
119
32.8
emh629680
Emiliania huxleyi
4.2e-10
68.2
83
44.6
emh341420
Emiliania huxleyi
4.2e-10
68.2
83
44.6
WBGene00010046
Caenorhabditis elegans
1.2e-09
66.6
129
34.1
Naga_100152g10
Nannochloropsis gaditana
1.6e-09
66.2
136
36.8
FBgn0034731
Drosophila melanogaster
6.1e-09
64.3
128
32.8
ENSG00000131773
Homo sapiens
1.4e-08
63.2
124
32.3
WBGene00013325
Caenorhabditis elegans
2.3e-08
62.4
119
35.3
ENSG00000121774
Homo sapiens
3.9e-08
61.6
127
33.1
tps81510
Thalassiosira pseudonana
8.8e-08
60.5
114
35.1
CC00G153390
Cyclotella cryptica
3.3e-07
58.5
94
36.2
CC00G15570
Cyclotella cryptica
5.7e-07
57.8
114
34.2
FBgn0022986
Drosophila melanogaster
9.7e-07
57.0
143
25.9
FBgn0034659
Drosophila melanogaster
1.7e-06
56.2
113
29.2
FBgn0022984
Drosophila melanogaster
2.8e-06
55.5
122
30.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (8 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing