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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G204390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G204390
Cyclotella cryptica
8.1e-216
750.7
358
100.0
tps230140
Thalassiosira pseudonana
3.5e-142
506.1
344
69.5
tho331580
Thalassiosira oceanica
8.1e-123
441.8
362
59.7
ps00G116560
Pseudo-nitzschia multiseries
3.2e-95
350.1
369
48.8
fso88210
Fistulifera solaris
1.3e-91
338.2
365
47.9
gene15488
Fragilariopsis cylindrus
2.4e-90
334.0
306
53.6
fso83820
Fistulifera solaris
2.4e-90
334.0
363
46.8
Sro49_g028720
Seminavis robusta
2.6e-89
330.5
346
47.4
ptri241570
Phaeodactylum tricornutum
5.8e-89
329.3
349
47.0
sya00G263590
Synedra acus
1.7e-88
327.8
355
48.2
PSNMU-V1.4_AUG-EV-PASAV3_0055930
Pseudo-nitzschia multistriata
7.9e-86
318.9
368
46.2
tho229920
Thalassiosira oceanica
2.1e-83
310.8
359
46.0
AA0021G01210
Aureococcus anophagefferens
7.0e-50
199.5
306
39.2
Pp3c1_21120
Physcomitrella patens
4.8e-43
176.8
355
32.1
AT5G67100
Arabidopsis thaliana
2.8e-35
151.0
376
31.6
YNL102W
Saccharomyces cerevisiae strain S288C
2.8e-35
151.0
298
32.2
emh272570
Emiliania huxleyi
1.1e-34
149.1
256
35.5
ccr140240
Chondrus crispus
9.1e-34
146.0
294
33.3
SPAC3H5.06c
Schizosaccharomyces pombe
6.5e-32
139.8
288
31.9
ENSG00000101868
Homo sapiens
1.4e-26
122.1
356
27.2
FBgn0259113
Drosophila melanogaster
2.0e-20
101.7
349
26.9
Cre04.g214350
Chlamydomonas reinhardtii
1.6e-17
92.0
159
35.8
WBGene00012936
Caenorhabditis elegans
2.7e-17
91.3
329
25.8
pte511280
Paramecium tetraurelia
1.1e-15
85.9
296
26.4
gsu98870
Galdieria sulphuraria
1.9e-15
85.1
133
35.3
CM09G01760
Cyanidioschyzon merolae
8.0e-14
79.7
175
32.6
tho648040
Thalassiosira oceanica
7.0e-10
66.6
73
49.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing