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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G194660
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G194660
Cyclotella cryptica
5.5e-209
728.0
349
100.0
CC00G34720
Cyclotella cryptica
9.7e-89
328.6
356
45.8
CC00G126410
Cyclotella cryptica
3.6e-83
310.1
369
46.3
CC00G145110
Cyclotella cryptica
7.5e-57
222.6
315
41.0
CC00G64800
Cyclotella cryptica
4.9e-40
166.8
136
56.6
CC00G49410
Cyclotella cryptica
6.4e-40
166.4
220
41.4
CC00G77800
Cyclotella cryptica
8.3e-40
166.0
92
88.0
CC00G152560
Cyclotella cryptica
2.1e-35
151.4
114
58.8
CC00G137290
Cyclotella cryptica
4.7e-35
150.2
312
32.1
gene18460
Fragilariopsis cylindrus
6.2e-35
149.8
374
29.7
gene448
Fragilariopsis cylindrus
6.2e-35
149.8
374
29.7
CC00G64410
Cyclotella cryptica
1.1e-34
149.1
212
41.0
CC00G202740
Cyclotella cryptica
2.3e-29
131.3
135
47.4
CC00G06520
Cyclotella cryptica
2.5e-28
127.9
241
34.9
gene17491
Fragilariopsis cylindrus
6.2e-27
123.2
371
25.9
ps00G159190
Pseudo-nitzschia multiseries
4.4e-25
117.1
347
27.1
gene8953
Fragilariopsis cylindrus
7.1e-23
109.8
257
30.7
Sro3079_g343350
Seminavis robusta
1.0e-21
105.9
371
25.1
Sro82_g043810
Seminavis robusta
1.3e-21
105.5
371
24.8
Sro42_g025650
Seminavis robusta
1.7e-21
105.1
371
24.8
Sro180_g078700
Seminavis robusta
3.0e-21
104.4
371
25.3
Sro166_g074151
Seminavis robusta
9.6e-20
99.4
214
29.9
Sro1210_g252710
Seminavis robusta
4.4e-17
90.5
167
31.1
Sro1607_g285550
Seminavis robusta
4.4e-17
90.5
320
23.8
ps00G69330
Pseudo-nitzschia multiseries
5.8e-17
90.1
141
37.6
Sro7_g005771
Seminavis robusta
5.8e-17
90.1
340
22.9
CC00G165850
Cyclotella cryptica
2.2e-16
88.2
339
23.0
CC00G168360
Cyclotella cryptica
3.8e-16
87.4
52
76.9
Sro996_g229220
Seminavis robusta
8.4e-16
86.3
145
33.1
Sro17_g012430
Seminavis robusta
8.4e-16
86.3
349
25.8
Sro42_g025520
Seminavis robusta
8.4e-16
86.3
167
29.9
Sro385_g131620
Seminavis robusta
1.1e-15
85.9
260
26.5
Sro1351_g265280
Seminavis robusta
1.1e-15
85.9
167
29.9
Sro1434_g272330
Seminavis robusta
1.9e-15
85.1
169
31.4
Sro63_g035820
Seminavis robusta
2.4e-15
84.7
168
31.0
Sro817_g206910
Seminavis robusta
3.2e-15
84.3
148
30.4
ps00G186110
Pseudo-nitzschia multiseries
4.2e-15
84.0
310
25.8
Sro1376_g267470
Seminavis robusta
5.4e-15
83.6
167
30.5
Sro1900_g304230
Seminavis robusta
9.3e-15
82.8
168
29.8
Sro1210_g252730
Seminavis robusta
2.1e-14
81.6
145
32.4
ps00G09660
Pseudo-nitzschia multiseries
4.6e-14
80.5
324
24.4
Sro1077_g238560
Seminavis robusta
8.7e-13
76.3
169
28.4
Sro1362_g266250
Seminavis robusta
3.3e-12
74.3
169
27.8
ps00G119160
Pseudo-nitzschia multiseries
5.6e-12
73.6
292
23.3
Sro744_g196200
Seminavis robusta
5.6e-12
73.6
305
24.3
Sro233_g094230
Seminavis robusta
7.3e-12
73.2
321
23.4
sya00G20960
Synedra acus
3.6e-11
70.9
145
32.4
sya00G232980
Synedra acus
1.8e-10
68.6
236
27.5
Sro2622_g332880
Seminavis robusta
3.1e-10
67.8
138
30.4
Sro1079_g238900
Seminavis robusta
4.0e-10
67.4
319
22.3
Sro507_g156580
Seminavis robusta
4.0e-10
67.4
362
24.9
Sro1951_g307410
Seminavis robusta
1.2e-09
65.9
130
26.9
sya00G112130
Synedra acus
2.6e-09
64.7
242
27.3
Sro2263_g321220
Seminavis robusta
3.4e-09
64.3
292
24.7
sya00G256100
Synedra acus
4.4e-09
63.9
124
34.7
Sro12_g009360
Seminavis robusta
9.9e-09
62.8
124
28.2
Sro1698_g291960
Seminavis robusta
9.9e-09
62.8
167
29.3
Sro436_g142710
Seminavis robusta
1.3e-08
62.4
168
26.8
sya00G75590
Synedra acus
8.4e-08
59.7
172
27.9
CC00G112460
Cyclotella cryptica
4.2e-07
57.4
44
68.2
sya00G128050
Synedra acus
5.4e-07
57.0
78
37.2
CC00G62360
Cyclotella cryptica
4.6e-06
53.9
99
35.4
CC00G70590
Cyclotella cryptica
6.0e-06
53.5
49
51.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (17 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (31 genes)
Synedra acus (6 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing