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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G177980
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G177980
Cyclotella cryptica
0.0e+00
3189.4
1638
100.0
CC00G87580
Cyclotella cryptica
0.0e+00
2036.5
1296
82.4
CC00G139280
Cyclotella cryptica
0.0e+00
1579.7
1675
52.4
CC00G110590
Cyclotella cryptica
0.0e+00
1571.2
1663
51.2
CC00G183890
Cyclotella cryptica
0.0e+00
1530.0
1689
51.7
CC00G28500
Cyclotella cryptica
0.0e+00
1493.0
1675
49.6
CC00G67280
Cyclotella cryptica
0.0e+00
1449.5
1661
49.7
tho02320
Thalassiosira oceanica
0.0e+00
1356.7
1237
55.3
tho146100
Thalassiosira oceanica
0.0e+00
1315.1
1280
54.1
CC00G205450
Cyclotella cryptica
0.0e+00
1127.9
1350
48.0
tho225040
Thalassiosira oceanica
2.3e-244
847.8
1353
38.4
tho24160
Thalassiosira oceanica
2.9e-223
777.7
1365
36.7
tho269800
Thalassiosira oceanica
1.2e-219
765.8
1009
42.3
tho113620
Thalassiosira oceanica
8.9e-212
739.6
1012
40.6
tho15640
Thalassiosira oceanica
7.3e-206
719.9
1285
36.1
CC00G168030
Cyclotella cryptica
2.3e-199
698.4
1140
41.6
CC00G87590
Cyclotella cryptica
3.9e-143
511.5
281
88.3
tho31100
Thalassiosira oceanica
2.6e-134
482.3
673
41.8
CC00G84140
Cyclotella cryptica
7.2e-121
437.6
322
63.4
tho207000
Thalassiosira oceanica
9.8e-118
427.2
499
47.3
CC00G178120
Cyclotella cryptica
3.5e-115
418.7
282
73.0
tho54340
Thalassiosira oceanica
3.6e-112
408.7
626
39.3
CC00G110470
Cyclotella cryptica
5.9e-107
391.3
288
68.1
tho400500
Thalassiosira oceanica
2.0e-94
349.7
629
35.5
tps233970
Thalassiosira pseudonana
6.6e-74
281.6
380
38.7
Sro1223_g253920
Seminavis robusta
2.2e-61
240.0
778
26.6
tho11860
Thalassiosira oceanica
1.2e-51
207.6
382
33.2
tps36400
Thalassiosira pseudonana
1.4e-39
167.5
454
30.0
tho119280
Thalassiosira oceanica
4.5e-38
162.5
222
42.3
tho402200
Thalassiosira oceanica
3.6e-35
152.9
118
62.7
Sro1294_g260160
Seminavis robusta
2.8e-32
143.3
326
30.7
tho490840
Thalassiosira oceanica
5.1e-26
122.5
129
48.8
tho235600
Thalassiosira oceanica
1.1e-23
114.8
201
39.3
Sro11_g008601
Seminavis robusta
1.2e-22
111.3
168
35.7
Cre01.g045850
Chlamydomonas reinhardtii
1.5e-22
110.9
441
25.2
Cre03.g186800
Chlamydomonas reinhardtii
5.9e-22
109.0
441
25.2
gene16553
Fragilariopsis cylindrus
5.9e-22
109.0
336
27.7
Cre16.g673450
Chlamydomonas reinhardtii
1.0e-21
108.2
441
24.9
tho421640
Thalassiosira oceanica
6.5e-21
105.5
169
41.4
Pp3c19_10880
Physcomitrella patens
8.5e-21
105.1
438
25.8
tho94400
Thalassiosira oceanica
1.9e-20
104.0
404
24.8
tho269740
Thalassiosira oceanica
2.5e-20
103.6
102
48.0
tho56660
Thalassiosira oceanica
4.2e-20
102.8
356
25.6
tho131480
Thalassiosira oceanica
4.2e-20
102.8
346
27.2
ccr162420
Chondrus crispus
5.5e-20
102.4
446
24.2
CC00G119970
Cyclotella cryptica
5.5e-20
102.4
194
35.6
ccr162020
Chondrus crispus
7.2e-20
102.1
446
24.2
tho20420
Thalassiosira oceanica
7.2e-20
102.1
407
25.6
tho293920
Thalassiosira oceanica
1.2e-19
101.3
354
25.7
tho338540
Thalassiosira oceanica
1.6e-19
100.9
354
25.4
tho69720
Thalassiosira oceanica
2.7e-19
100.1
155
40.0
Naga_101065g1
Nannochloropsis gaditana
3.6e-19
99.8
371
24.3
fso181140
Fistulifera solaris
4.7e-19
99.4
408
25.0
tho111660
Thalassiosira oceanica
4.7e-19
99.4
354
24.6
Cre03.g183950
Chlamydomonas reinhardtii
1.0e-18
98.2
368
25.5
Naga_101146g2
Nannochloropsis gaditana
1.0e-18
98.2
371
24.3
Naga_100497g3
Nannochloropsis gaditana
1.4e-18
97.8
371
24.0
CC00G35370
Cyclotella cryptica
1.8e-18
97.4
460
23.7
Naga_100055g1
Nannochloropsis gaditana
5.2e-18
95.9
370
24.3
Naga_101002g3
Nannochloropsis gaditana
1.1e-17
94.7
370
24.1
AT4G23160
Arabidopsis thaliana
3.3e-17
93.2
436
24.1
fso38500
Fistulifera solaris
3.3e-17
93.2
444
24.1
tho201080
Thalassiosira oceanica
4.4e-17
92.8
128
40.6
fso11910
Fistulifera solaris
7.4e-17
92.0
938
22.0
fso06610
Fistulifera solaris
9.7e-17
91.7
886
21.8
tho83920
Thalassiosira oceanica
9.7e-17
91.7
347
27.1
tho105160
Thalassiosira oceanica
1.3e-16
91.3
392
25.0
CC00G30360
Cyclotella cryptica
1.7e-16
90.9
356
25.0
tho197380
Thalassiosira oceanica
1.7e-16
90.9
392
25.0
fso11860
Fistulifera solaris
2.8e-16
90.1
391
25.1
Naga_100433g2
Nannochloropsis gaditana
2.8e-16
90.1
337
24.6
tho64380
Thalassiosira oceanica
3.7e-16
89.7
390
24.6
tho583900
Thalassiosira oceanica
3.7e-16
89.7
116
45.7
tho16720
Thalassiosira oceanica
6.3e-16
89.0
347
27.1
CC00G100660
Cyclotella cryptica
1.8e-15
87.4
393
24.2
Ec-07_000280
Ectocarpus siliculosus
1.8e-15
87.4
401
23.2
CC00G06130
Cyclotella cryptica
3.1e-15
86.7
404
24.3
Naga_100252g2
Nannochloropsis gaditana
3.1e-15
86.7
371
22.6
Pp3c11_12670
Physcomitrella patens
3.1e-15
86.7
339
25.7
fso200830
Fistulifera solaris
4.1e-15
86.3
389
24.7
Pp3c7_15950
Physcomitrella patens
9.1e-15
85.1
403
23.6
tho219020
Thalassiosira oceanica
1.2e-14
84.7
416
24.0
CC00G141300
Cyclotella cryptica
1.6e-14
84.3
335
25.1
Pp3c23_1320
Physcomitrella patens
1.6e-14
84.3
951
21.5
tho123740
Thalassiosira oceanica
2.6e-14
83.6
363
24.2
Naga_101948g1
Nannochloropsis gaditana
5.9e-14
82.4
312
24.4
ccr12580
Chondrus crispus
1.3e-13
81.3
419
22.2
ccr12660
Chondrus crispus
1.3e-13
81.3
324
24.4
tho385140
Thalassiosira oceanica
2.2e-13
80.5
153
34.6
tho158140
Thalassiosira oceanica
2.9e-13
80.1
359
24.5
CC00G161440
Cyclotella cryptica
5.0e-13
79.3
360
25.0
tho01120
Thalassiosira oceanica
8.5e-13
78.6
971
18.8
fso174580
Fistulifera solaris
1.1e-12
78.2
179
29.6
tho78180
Thalassiosira oceanica
1.1e-12
78.2
363
24.0
ccr162000
Chondrus crispus
1.5e-12
77.8
345
22.9
tho94380
Thalassiosira oceanica
2.5e-12
77.0
418
23.0
fso76400
Fistulifera solaris
3.2e-12
76.6
366
23.8
tho86000
Thalassiosira oceanica
4.2e-12
76.3
336
23.8
ccr12600
Chondrus crispus
5.5e-12
75.9
368
22.8
fso121990
Fistulifera solaris
5.5e-12
75.9
418
23.0
CC00G00700
Cyclotella cryptica
7.2e-12
75.5
389
22.6
CC00G120870
Cyclotella cryptica
7.2e-12
75.5
389
22.6
ps00G111280
Pseudo-nitzschia multiseries
2.7e-11
73.6
172
30.2
sya00G45490
Synedra acus
2.7e-11
73.6
347
24.8
sya00G236680
Synedra acus
2.7e-11
73.6
347
24.8
CC00G170210
Cyclotella cryptica
3.6e-11
73.2
217
27.6
Ec-05_005370
Ectocarpus siliculosus
3.6e-11
73.2
327
25.4
Ec-12_008930
Ectocarpus siliculosus
3.6e-11
73.2
327
25.4
ptri235170
Phaeodactylum tricornutum
8.0e-11
72.0
388
24.0
Sro1693_g291681
Seminavis robusta
1.8e-10
70.9
217
25.8
Ec-21_000440
Ectocarpus siliculosus
2.3e-10
70.5
318
24.8
ptri126960
Phaeodactylum tricornutum
4.0e-10
69.7
388
24.5
gene3576
Fragilariopsis cylindrus
5.2e-10
69.3
302
22.2
tho418560
Thalassiosira oceanica
8.8e-10
68.6
360
23.6
ccr12560
Chondrus crispus
1.2e-09
68.2
368
21.5
fso127800
Fistulifera solaris
1.2e-09
68.2
370
23.2
ptri01860
Phaeodactylum tricornutum
1.5e-09
67.8
388
24.5
tho620840
Thalassiosira oceanica
2.6e-09
67.0
40
75.0
Naga_101142g1
Nannochloropsis gaditana
4.4e-09
66.2
133
30.8
ccr12540
Chondrus crispus
9.8e-09
65.1
149
32.2
Naga_100294g11
Nannochloropsis gaditana
9.8e-09
65.1
145
29.7
ptri03380
Phaeodactylum tricornutum
9.8e-09
65.1
375
22.4
ptri12510
Phaeodactylum tricornutum
9.8e-09
65.1
375
22.4
ptri03400
Phaeodactylum tricornutum
1.3e-08
64.7
375
22.4
ptri115080
Phaeodactylum tricornutum
1.3e-08
64.7
375
22.4
tho643920
Thalassiosira oceanica
1.7e-08
64.3
105
38.1
tho89820
Thalassiosira oceanica
2.2e-08
63.9
269
24.9
tho163240
Thalassiosira oceanica
2.8e-08
63.5
445
20.4
Naga_100533g2
Nannochloropsis gaditana
3.7e-08
63.2
134
30.6
Sro1780_g078321
Seminavis robusta
4.8e-08
62.8
198
24.2
ptri235190
Phaeodactylum tricornutum
6.3e-08
62.4
295
24.1
ptri195630
Phaeodactylum tricornutum
8.3e-08
62.0
326
23.0
tho139880
Thalassiosira oceanica
8.3e-08
62.0
364
21.7
tho158000
Thalassiosira oceanica
8.3e-08
62.0
364
21.7
fso27090
Fistulifera solaris
1.1e-07
61.6
377
21.0
tho26600
Thalassiosira oceanica
1.1e-07
61.6
368
22.0
tho99520
Thalassiosira oceanica
1.4e-07
61.2
129
29.5
ptri67680
Phaeodactylum tricornutum
1.8e-07
60.8
374
23.3
ptri74300
Phaeodactylum tricornutum
3.1e-07
60.1
332
23.8
CC00G159220
Cyclotella cryptica
4.1e-07
59.7
340
22.1
ptri239190
Phaeodactylum tricornutum
5.4e-07
59.3
326
23.6
ptri240460
Phaeodactylum tricornutum
5.4e-07
59.3
326
24.2
CC00G68530
Cyclotella cryptica
7.0e-07
58.9
334
20.4
fso95580
Fistulifera solaris
7.0e-07
58.9
426
20.4
CC00G48350
Cyclotella cryptica
1.2e-06
58.2
180
27.8
fso63650
Fistulifera solaris
2.7e-06
57.0
412
21.6
sya00G164780
Synedra acus
3.5e-06
56.6
335
22.1
tho53680
Thalassiosira oceanica
3.5e-06
56.6
367
21.5
ccr195620
Chondrus crispus
4.5e-06
56.2
87
35.6
CC00G170410
Cyclotella cryptica
5.9e-06
55.8
180
25.6
CC00G92410
Cyclotella cryptica
7.7e-06
55.5
339
20.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (13 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (51 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (13 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (28 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (11 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (9 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (5 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing