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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G169470
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G169470
Cyclotella cryptica
0.0e+00
1386.3
706
100.0
tps135490
Thalassiosira pseudonana
2.4e-272
939.5
704
70.3
tho70500
Thalassiosira oceanica
8.6e-270
931.0
708
68.8
sya00G219790
Synedra acus
1.6e-223
777.3
704
60.1
ptri64360
Phaeodactylum tricornutum
1.8e-219
763.8
694
58.6
gene17148
Fragilariopsis cylindrus
3.0e-214
746.5
708
55.6
Sro1577_g283570
Seminavis robusta
1.3e-212
741.1
705
58.0
ps00G32530
Pseudo-nitzschia multiseries
4.1e-211
736.1
703
55.9
fso174840
Fistulifera solaris
3.2e-192
673.3
692
53.6
fso66610
Fistulifera solaris
3.7e-188
659.8
703
53.1
Naga_100002g59
Nannochloropsis gaditana
2.5e-168
594.0
720
47.5
AT3G20780
Arabidopsis thaliana
9.2e-147
522.3
670
44.0
Pp3c22_12720
Physcomitrella patens
1.3e-145
518.5
659
44.6
Cre01.g019750
Chlamydomonas reinhardtii
9.9e-141
502.3
581
46.6
CM20G02730
Cyanidioschyzon merolae
1.6e-135
485.0
661
42.5
ccr50220
Chondrus crispus
2.3e-129
464.5
637
41.4
AA0025G01190
Aureococcus anophagefferens
3.9e-105
384.0
506
45.5
emh470830
Emiliania huxleyi
3.7e-79
297.7
589
37.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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