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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G168460
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G168460
Cyclotella cryptica
0.0e+00
1347.4
974
100.0
tho113120
Thalassiosira oceanica
1.9e-89
332.4
1107
36.0
fso68870
Fistulifera solaris
3.0e-47
192.2
767
26.3
fso197560
Fistulifera solaris
1.6e-43
179.9
775
27.0
ptri140290
Phaeodactylum tricornutum
1.3e-42
176.8
848
24.3
tho387000
Thalassiosira oceanica
3.8e-34
148.7
89
68.5
sya00G01200
Synedra acus
9.8e-30
134.0
759
25.4
sya00G14620
Synedra acus
3.8e-26
122.1
360
28.3
tho543740
Thalassiosira oceanica
3.6e-24
115.5
310
29.0
PSNMU-V1.4_AUG-EV-PASAV3_0090040
Pseudo-nitzschia multistriata
5.7e-22
108.2
109
55.0
tho261300
Thalassiosira oceanica
1.1e-20
104.0
188
38.8
Sro1496_g277520
Seminavis robusta
1.4e-20
103.6
78
56.4
gene14745
Fragilariopsis cylindrus
1.3e-18
97.1
136
46.3
tho79580
Thalassiosira oceanica
3.3e-17
92.4
78
53.8
Ec-10_002390
Ectocarpus siliculosus
1.2e-11
73.9
371
27.5
Ec-01_006950
Ectocarpus siliculosus
1.3e-10
70.5
50
56.0
ENSG00000171634
Homo sapiens
1.3e-10
70.5
54
46.3
Ec-05_002750
Ectocarpus siliculosus
2.3e-10
69.7
56
50.0
ENSG00000147854
Homo sapiens
2.3e-10
69.7
68
45.6
Pp3c6_8120
Physcomitrella patens
2.5e-09
66.2
48
56.2
ENSG00000276043
Homo sapiens
3.3e-09
65.9
67
38.8
Naga_100244g3
Nannochloropsis gaditana
5.6e-09
65.1
79
40.5
Pp3c5_19640
Physcomitrella patens
5.6e-09
65.1
48
54.2
CC00G36410
Cyclotella cryptica
7.3e-09
64.7
64
35.9
PSNMU-V1.4_AUG-EV-PASAV3_0114510
Pseudo-nitzschia multistriata
3.6e-08
62.4
64
40.6
FBgn0000541
Drosophila melanogaster
6.2e-08
61.6
66
39.4
FBgn0262519
Drosophila melanogaster
1.1e-07
60.8
56
41.1
AT3G01460
Arabidopsis thaliana
1.4e-07
60.5
48
45.8
ENSG00000170004
Homo sapiens
1.4e-07
60.5
72
36.1
ENSG00000116254
Homo sapiens
1.8e-07
60.1
51
43.1
ps00G132040
Pseudo-nitzschia multiseries
1.8e-07
60.1
64
42.2
ENSG00000111642
Homo sapiens
2.3e-07
59.7
57
40.4
tho110880
Thalassiosira oceanica
4.0e-07
58.9
52
42.3
CC00G11620
Cyclotella cryptica
5.2e-07
58.5
59
42.4
tho260400
Thalassiosira oceanica
5.2e-07
58.5
37
67.6
FBgn0031759
Drosophila melanogaster
6.8e-07
58.2
48
45.8
Cre09.g398141
Chlamydomonas reinhardtii
1.2e-06
57.4
48
50.0
WBGene00000482
Caenorhabditis elegans
1.5e-06
57.0
71
33.8
AT1G77250
Arabidopsis thaliana
2.0e-06
56.6
67
38.8
ENSG00000197323
Homo sapiens
2.0e-06
56.6
54
44.4
Pp3c1_860
Physcomitrella patens
2.0e-06
56.6
48
45.8
Ec-12_006400
Ectocarpus siliculosus
2.6e-06
56.2
47
44.7
Pp3c18_19040
Physcomitrella patens
2.6e-06
56.2
48
43.8
Pp3c18_19045
Physcomitrella patens
2.6e-06
56.2
48
43.8
YJR119C
Saccharomyces cerevisiae strain S288C
2.6e-06
56.2
49
42.9
AT5G44800
Arabidopsis thaliana
3.4e-06
55.8
68
36.8
tho206560
Thalassiosira oceanica
3.4e-06
55.8
65
35.4
Cre08.g380151
Chlamydomonas reinhardtii
4.4e-06
55.5
47
46.8
CC00G160670
Cyclotella cryptica
4.4e-06
55.5
48
43.8
gene12797
Fragilariopsis cylindrus
4.4e-06
55.5
65
38.5
ENSG00000198604
Homo sapiens
4.4e-06
55.5
47
42.6
ENSG00000122779
Homo sapiens
4.4e-06
55.5
48
45.8
Cre05.g235400
Chlamydomonas reinhardtii
5.8e-06
55.1
48
45.8
fso106920
Fistulifera solaris
5.8e-06
55.1
71
38.0
fso193920
Fistulifera solaris
7.5e-06
54.7
71
38.0
ENSG00000009954
Homo sapiens
7.5e-06
54.7
47
44.7
tps93600
Thalassiosira pseudonana
7.5e-06
54.7
54
37.0
gsu78360
Galdieria sulphuraria
9.8e-06
54.3
50
42.0
gsu78380
Galdieria sulphuraria
9.8e-06
54.3
50
42.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (8 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (10 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing