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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G166180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G166180
Cyclotella cryptica
0.0e+00
1875.5
909
100.0
CC00G195190
Cyclotella cryptica
0.0e+00
1306.2
951
66.4
CC00G187070
Cyclotella cryptica
0.0e+00
1273.5
951
64.2
CC00G173820
Cyclotella cryptica
0.0e+00
1270.0
951
64.1
CC00G10590
Cyclotella cryptica
0.0e+00
1245.3
951
64.0
CC00G117490
Cyclotella cryptica
0.0e+00
1203.0
951
61.3
CC00G104220
Cyclotella cryptica
0.0e+00
1109.0
876
62.0
CC00G166320
Cyclotella cryptica
1.9e-301
1036.6
952
54.1
CC00G104510
Cyclotella cryptica
2.0e-295
1016.5
788
63.6
CC00G159850
Cyclotella cryptica
1.2e-287
990.7
952
51.8
CC00G179050
Cyclotella cryptica
6.9e-280
964.9
929
52.9
CC00G38870
Cyclotella cryptica
1.0e-278
961.1
954
51.2
CC00G121790
Cyclotella cryptica
8.8e-275
948.0
902
54.4
CC00G148060
Cyclotella cryptica
3.5e-263
909.4
958
49.8
CC00G119580
Cyclotella cryptica
2.3e-259
896.7
935
49.8
CC00G116240
Cyclotella cryptica
2.0e-255
883.6
728
60.3
CC00G101020
Cyclotella cryptica
5.6e-221
769.2
908
46.3
CC00G146910
Cyclotella cryptica
2.1e-207
724.2
955
41.0
CC00G05200
Cyclotella cryptica
5.1e-206
719.5
794
47.9
CC00G111420
Cyclotella cryptica
2.2e-185
651.0
758
47.2
CC00G55720
Cyclotella cryptica
1.0e-177
625.5
616
53.9
CC00G199000
Cyclotella cryptica
2.0e-170
601.3
666
48.5
CC00G128120
Cyclotella cryptica
1.6e-167
591.7
649
48.5
CC00G57350
Cyclotella cryptica
7.4e-165
582.8
820
40.7
CC00G92240
Cyclotella cryptica
7.7e-162
572.8
632
50.0
CC00G103560
Cyclotella cryptica
6.5e-161
569.7
669
45.1
CC00G108610
Cyclotella cryptica
6.5e-161
569.7
669
45.1
CC00G167330
Cyclotella cryptica
2.3e-150
534.6
479
55.5
CC00G75750
Cyclotella cryptica
2.8e-148
527.7
420
59.0
CC00G55520
Cyclotella cryptica
1.7e-145
518.5
472
54.2
CC00G194940
Cyclotella cryptica
5.2e-134
480.3
563
45.6
CC00G03450
Cyclotella cryptica
1.6e-119
432.2
724
35.8
CC00G22050
Cyclotella cryptica
2.1e-119
431.8
470
48.5
CC00G55530
Cyclotella cryptica
6.2e-119
430.3
392
52.3
CC00G154760
Cyclotella cryptica
8.3e-116
419.9
352
61.1
CC00G181420
Cyclotella cryptica
1.1e-115
419.5
390
54.9
tho276200
Thalassiosira oceanica
8.6e-113
409.8
968
29.0
CC00G208310
Cyclotella cryptica
4.3e-112
407.5
272
72.4
tho00840
Thalassiosira oceanica
2.8e-111
404.8
970
28.9
CC00G07400
Cyclotella cryptica
3.1e-110
401.4
378
53.7
CC00G71860
Cyclotella cryptica
1.5e-104
382.5
412
46.6
CC00G104430
Cyclotella cryptica
6.2e-103
377.1
489
43.1
CC00G150340
Cyclotella cryptica
3.4e-101
371.3
356
53.4
CC00G167340
Cyclotella cryptica
9.9e-101
369.8
367
49.6
CC00G67610
Cyclotella cryptica
1.4e-94
349.4
318
57.5
CC00G160750
Cyclotella cryptica
2.4e-94
348.6
306
58.2
tho130240
Thalassiosira oceanica
6.9e-94
347.1
989
27.0
CC00G55730
Cyclotella cryptica
1.4e-91
339.3
297
52.2
tho94120
Thalassiosira oceanica
1.3e-89
332.8
966
27.0
CC00G59880
Cyclotella cryptica
4.8e-87
324.3
947
27.5
CC00G55080
Cyclotella cryptica
6.2e-87
323.9
230
64.3
CC00G61860
Cyclotella cryptica
1.1e-86
323.2
964
26.8
CC00G115300
Cyclotella cryptica
1.1e-86
323.2
964
26.8
CC00G04170
Cyclotella cryptica
7.6e-85
317.0
948
26.2
CC00G109370
Cyclotella cryptica
1.3e-84
316.2
410
42.2
tho19980
Thalassiosira oceanica
4.9e-84
314.3
742
29.5
CC00G189900
Cyclotella cryptica
8.4e-84
313.5
955
26.4
CC00G39570
Cyclotella cryptica
7.1e-83
310.5
974
26.7
CC00G109380
Cyclotella cryptica
4.6e-82
307.8
409
40.6
CC00G81820
Cyclotella cryptica
7.9e-82
307.0
949
26.0
tho129360
Thalassiosira oceanica
3.3e-80
301.6
983
25.6
CC00G117570
Cyclotella cryptica
3.4e-77
291.6
954
25.8
tho13180
Thalassiosira oceanica
1.0e-73
280.0
1001
24.9
CC00G118680
Cyclotella cryptica
2.9e-68
261.9
185
70.3
CC00G178820
Cyclotella cryptica
2.9e-68
261.9
185
70.3
CC00G99400
Cyclotella cryptica
4.3e-64
248.1
709
26.2
CC00G97130
Cyclotella cryptica
7.4e-64
247.3
871
25.4
CC00G71850
Cyclotella cryptica
1.3e-63
246.5
253
51.8
CC00G119030
Cyclotella cryptica
5.3e-62
241.1
318
41.5
CC00G54200
Cyclotella cryptica
1.3e-60
236.5
855
24.0
CC00G71870
Cyclotella cryptica
5.0e-60
234.6
228
50.0
CC00G188250
Cyclotella cryptica
2.1e-58
229.2
652
27.3
CC00G68540
Cyclotella cryptica
6.1e-58
227.6
724
27.6
CC00G02490
Cyclotella cryptica
3.0e-57
225.3
192
56.8
CC00G193320
Cyclotella cryptica
3.0e-57
225.3
727
26.1
CC00G45070
Cyclotella cryptica
5.1e-57
224.6
201
53.2
CC00G160440
Cyclotella cryptica
6.7e-57
224.2
304
41.4
CC00G100740
Cyclotella cryptica
1.1e-56
223.4
158
63.9
CC00G132700
Cyclotella cryptica
4.3e-56
221.5
180
62.8
CC00G91720
Cyclotella cryptica
2.6e-53
212.2
621
27.2
CC00G197840
Cyclotella cryptica
3.4e-53
211.8
651
27.8
tho309780
Thalassiosira oceanica
5.5e-51
204.5
453
31.8
CC00G150030
Cyclotella cryptica
7.9e-50
200.7
227
42.7
tho471800
Thalassiosira oceanica
1.4e-49
199.9
588
26.2
CC00G126180
Cyclotella cryptica
4.8e-47
191.4
198
50.5
CC00G126140
Cyclotella cryptica
1.5e-45
186.4
569
25.7
CC00G21780
Cyclotella cryptica
8.0e-42
174.1
451
29.7
CC00G179700
Cyclotella cryptica
6.7e-41
171.0
570
26.0
CC00G134430
Cyclotella cryptica
2.6e-37
159.1
424
29.0
CC00G141160
Cyclotella cryptica
3.0e-33
145.6
350
26.9
CC00G101730
Cyclotella cryptica
4.0e-33
145.2
440
27.3
CC00G14100
Cyclotella cryptica
8.8e-33
144.1
926
23.2
CC00G203700
Cyclotella cryptica
4.4e-32
141.7
339
29.5
CC00G45260
Cyclotella cryptica
1.4e-30
136.7
75
89.3
CC00G85050
Cyclotella cryptica
1.4e-30
136.7
75
89.3
CC00G135330
Cyclotella cryptica
4.1e-30
135.2
470
24.0
CC00G128270
Cyclotella cryptica
9.1e-30
134.0
344
27.3
fso152990
Fistulifera solaris
3.5e-29
132.1
911
22.6
CC00G210110
Cyclotella cryptica
1.7e-28
129.8
96
67.7
CC00G101740
Cyclotella cryptica
2.9e-28
129.0
341
26.7
tps00080
Thalassiosira pseudonana
8.5e-28
127.5
919
21.7
CC00G22060
Cyclotella cryptica
2.5e-27
125.9
118
48.3
CC00G21790
Cyclotella cryptica
3.2e-27
125.6
341
27.0
CC00G181490
Cyclotella cryptica
5.5e-27
124.8
81
72.8
CC00G103690
Cyclotella cryptica
1.2e-26
123.6
118
47.5
CC00G47410
Cyclotella cryptica
3.6e-26
122.1
109
54.1
CC00G04460
Cyclotella cryptica
8.0e-26
120.9
98
53.1
tho552160
Thalassiosira oceanica
1.0e-25
120.6
231
30.7
CC00G29180
Cyclotella cryptica
1.4e-25
120.2
175
39.4
tps45900
Thalassiosira pseudonana
1.1e-22
110.5
818
22.0
tps227160
Thalassiosira pseudonana
1.1e-22
110.5
912
21.7
CC00G25520
Cyclotella cryptica
2.4e-22
109.4
354
28.0
CC00G68500
Cyclotella cryptica
1.2e-21
107.1
173
37.6
CC00G199050
Cyclotella cryptica
3.5e-21
105.5
171
34.5
gene19690
Fragilariopsis cylindrus
3.5e-21
105.5
983
20.9
CC00G91730
Cyclotella cryptica
3.8e-20
102.1
271
27.7
gene5106
Fragilariopsis cylindrus
3.8e-20
102.1
996
20.1
CC00G02010
Cyclotella cryptica
6.5e-20
101.3
191
35.6
sya00G216750
Synedra acus
4.2e-19
98.6
950
18.6
tps222480
Thalassiosira pseudonana
9.5e-19
97.4
895
20.6
CC00G103660
Cyclotella cryptica
1.2e-18
97.1
242
29.8
CC00G171940
Cyclotella cryptica
8.0e-18
94.4
247
26.3
tps232340
Thalassiosira pseudonana
6.8e-17
91.3
811
21.2
CC00G174450
Cyclotella cryptica
1.2e-16
90.5
116
41.4
CC00G162990
Cyclotella cryptica
1.5e-16
90.1
118
41.5
CC00G193310
Cyclotella cryptica
2.0e-16
89.7
114
40.4
CC00G169620
Cyclotella cryptica
8.3e-15
84.3
45
88.9
tps86030
Thalassiosira pseudonana
4.1e-14
82.0
262
24.0
tps234120
Thalassiosira pseudonana
4.1e-14
82.0
262
24.0
tho409900
Thalassiosira oceanica
7.0e-14
81.3
221
26.2
tps00060
Thalassiosira pseudonana
7.8e-13
77.8
263
23.6
tho467380
Thalassiosira oceanica
1.3e-12
77.0
285
26.3
tho436020
Thalassiosira oceanica
2.3e-12
76.3
221
24.4
sya00G240770
Synedra acus
5.0e-12
75.1
460
20.9
CC00G83010
Cyclotella cryptica
6.6e-12
74.7
136
31.6
CC00G140330
Cyclotella cryptica
6.6e-12
74.7
190
24.2
CC00G179710
Cyclotella cryptica
1.5e-11
73.6
136
34.6
Sro816_g206740
Seminavis robusta
7.3e-11
71.2
175
28.0
tps69600
Thalassiosira pseudonana
2.1e-10
69.7
285
21.4
CC00G51580
Cyclotella cryptica
3.6e-10
68.9
99
37.4
tho554560
Thalassiosira oceanica
4.7e-10
68.6
324
25.3
tps76040
Thalassiosira pseudonana
6.1e-10
68.2
174
26.4
sya00G40850
Synedra acus
2.3e-09
66.2
243
23.9
Sro173_g076451
Seminavis robusta
5.2e-09
65.1
262
24.0
tho454920
Thalassiosira oceanica
5.2e-09
65.1
153
27.5
sya00G168380
Synedra acus
2.0e-08
63.2
117
27.4
fso172650
Fistulifera solaris
2.6e-08
62.8
280
23.2
sya00G115920
Synedra acus
4.4e-08
62.0
117
26.5
sya00G168390
Synedra acus
1.3e-07
60.5
122
26.2
tho152160
Thalassiosira oceanica
1.7e-07
60.1
73
41.1
CC00G108080
Cyclotella cryptica
4.9e-07
58.5
135
26.7
sya00G21880
Synedra acus
4.9e-07
58.5
263
23.6
CC00G203720
Cyclotella cryptica
6.4e-07
58.2
132
30.3
sya00G265570
Synedra acus
6.4e-07
58.2
110
30.0
sya00G07940
Synedra acus
1.4e-06
57.0
108
30.6
gene14470
Fragilariopsis cylindrus
1.8e-06
56.6
119
25.2
sya00G208150
Synedra acus
1.8e-06
56.6
115
28.7
CC00G203710
Cyclotella cryptica
3.2e-06
55.8
104
35.6
CC00G153560
Cyclotella cryptica
5.4e-06
55.1
125
28.0
sya00G115880
Synedra acus
9.2e-06
54.3
123
23.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (10 genes)
Thalassiosira oceanica (16 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (116 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (11 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing