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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G16360
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G16360
Cyclotella cryptica
4.2e-116
418.7
204
100.0
CC00G170920
Cyclotella cryptica
1.6e-99
363.6
202
88.6
CC00G36700
Cyclotella cryptica
1.5e-65
250.8
145
84.1
CC00G67460
Cyclotella cryptica
4.4e-65
249.2
133
92.5
CC00G20910
Cyclotella cryptica
4.4e-57
222.6
180
59.4
CC00G109430
Cyclotella cryptica
1.1e-47
191.4
168
54.2
sya00G238580
Synedra acus
1.8e-42
174.1
195
45.6
sya00G103790
Synedra acus
2.6e-41
170.2
181
49.2
sya00G191580
Synedra acus
9.2e-39
161.8
181
47.5
sya00G212950
Synedra acus
1.2e-38
161.4
187
44.4
sya00G93160
Synedra acus
1.6e-38
161.0
169
47.9
sya00G93260
Synedra acus
1.6e-38
161.0
169
47.9
sya00G93190
Synedra acus
2.3e-37
157.1
169
47.3
sya00G246540
Synedra acus
5.0e-37
156.0
185
44.3
sya00G62270
Synedra acus
2.1e-35
150.6
186
41.9
sya00G245830
Synedra acus
1.0e-34
148.3
150
49.3
sya00G79880
Synedra acus
3.1e-34
146.7
155
47.1
sya00G207820
Synedra acus
1.2e-33
144.8
170
42.9
PSNMU-V1.4_AUG-EV-PASAV3_0001900
Pseudo-nitzschia multistriata
7.5e-33
142.1
189
43.4
PSNMU-V1.4_AUG-EV-PASAV3_0011870
Pseudo-nitzschia multistriata
3.7e-32
139.8
189
42.3
sya00G102460
Synedra acus
3.7e-32
139.8
159
47.2
sya00G03650
Synedra acus
8.3e-32
138.7
172
43.6
PSNMU-V1.4_AUG-EV-PASAV3_0006560
Pseudo-nitzschia multistriata
1.4e-31
137.9
189
41.3
sya00G57360
Synedra acus
1.2e-30
134.8
158
44.3
sya00G210010
Synedra acus
2.7e-30
133.7
147
44.9
sya00G221970
Synedra acus
6.6e-29
129.0
146
45.2
sya00G59300
Synedra acus
1.9e-28
127.5
195
38.5
sya00G186020
Synedra acus
4.0e-26
119.8
154
41.6
sya00G181920
Synedra acus
3.2e-23
110.2
135
43.7
sya00G92690
Synedra acus
7.0e-23
109.0
108
52.8
sya00G209520
Synedra acus
2.3e-21
104.0
156
38.5
sya00G59140
Synedra acus
5.1e-21
102.8
129
41.9
sya00G65920
Synedra acus
6.6e-21
102.4
108
46.3
sya00G158680
Synedra acus
8.6e-21
102.1
107
46.7
sya00G253490
Synedra acus
4.3e-20
99.8
107
45.8
sya00G165500
Synedra acus
7.3e-20
99.0
94
48.9
sya00G156700
Synedra acus
6.8e-18
92.4
86
48.8
sya00G225640
Synedra acus
2.0e-17
90.9
94
45.7
sya00G05190
Synedra acus
3.4e-17
90.1
96
46.9
sya00G49780
Synedra acus
4.4e-17
89.7
104
44.2
sya00G146680
Synedra acus
3.7e-16
86.7
172
33.1
sya00G271160
Synedra acus
3.7e-16
86.7
114
40.4
sya00G122890
Synedra acus
4.9e-16
86.3
116
43.1
sya00G59780
Synedra acus
8.3e-16
85.5
135
38.5
sya00G180660
Synedra acus
7.1e-15
82.4
91
45.1
sya00G225580
Synedra acus
9.2e-15
82.0
103
43.7
sya00G248190
Synedra acus
2.1e-14
80.9
99
40.4
fso163300
Fistulifera solaris
2.7e-14
80.5
176
30.7
tho86000
Thalassiosira oceanica
4.6e-14
79.7
173
29.5
ps00G26680
Pseudo-nitzschia multiseries
1.3e-13
78.2
142
32.4
sya00G151540
Synedra acus
2.3e-13
77.4
90
43.3
sya00G214840
Synedra acus
3.9e-13
76.6
85
42.4
sya00G60910
Synedra acus
6.6e-13
75.9
64
53.1
sya00G03850
Synedra acus
1.1e-12
75.1
77
46.8
sya00G145620
Synedra acus
2.5e-12
73.9
74
47.3
CC00G35440
Cyclotella cryptica
9.5e-12
72.0
168
29.2
sya00G161340
Synedra acus
9.5e-12
72.0
99
37.4
CC00G37390
Cyclotella cryptica
1.2e-11
71.6
167
28.7
CC00G45280
Cyclotella cryptica
1.6e-11
71.2
173
27.7
CC00G166190
Cyclotella cryptica
4.7e-11
69.7
173
28.3
sya00G177030
Synedra acus
1.4e-10
68.2
96
37.5
sya00G158100
Synedra acus
5.2e-10
66.2
180
28.9
sya00G75970
Synedra acus
8.9e-10
65.5
105
34.3
CC00G17610
Cyclotella cryptica
1.5e-09
64.7
173
27.7
fso79470
Fistulifera solaris
1.5e-09
64.7
172
29.1
sya00G225180
Synedra acus
1.5e-09
64.7
108
32.4
fso200820
Fistulifera solaris
2.6e-09
63.9
172
29.1
ccr162000
Chondrus crispus
4.4e-09
63.2
169
32.5
sya00G197450
Synedra acus
4.4e-09
63.2
66
42.4
CC00G07460
Cyclotella cryptica
5.8e-09
62.8
32
84.4
sya00G76460
Synedra acus
9.9e-09
62.0
45
57.8
tho105160
Thalassiosira oceanica
1.3e-08
61.6
170
29.4
CC00G170210
Cyclotella cryptica
1.7e-08
61.2
155
30.3
sya00G103640
Synedra acus
2.9e-08
60.5
45
53.3
tho123740
Thalassiosira oceanica
8.4e-08
58.9
186
29.0
tho197380
Thalassiosira oceanica
1.4e-07
58.2
155
29.7
ccr12640
Chondrus crispus
2.4e-07
57.4
144
31.9
Sro4424_g353970
Seminavis robusta
2.4e-07
57.4
51
47.1
sya00G135050
Synedra acus
9.2e-07
55.5
62
40.3
tho78180
Thalassiosira oceanica
9.2e-07
55.5
176
27.3
fso95610
Fistulifera solaris
2.7e-06
53.9
171
22.2
Sro882_g215390
Seminavis robusta
2.7e-06
53.9
46
45.7
sya00G229840
Synedra acus
2.7e-06
53.9
158
28.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (13 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (53 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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