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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G160370
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G160370
Cyclotella cryptica
0.0e+00
2647.1
1471
100.0
tps143220
Thalassiosira pseudonana
3.1e-277
956.8
1256
46.0
tho290060
Thalassiosira oceanica
4.7e-209
730.3
1120
41.9
ps00G56740
Pseudo-nitzschia multiseries
2.1e-177
625.2
1455
31.4
gene6568
Fragilariopsis cylindrus
7.0e-173
610.1
1480
31.1
Sro245_g097490
Seminavis robusta
1.5e-170
602.4
1444
31.5
PSNMU-V1.4_AUG-EV-PASAV3_0016220
Pseudo-nitzschia multistriata
1.2e-169
599.4
1481
30.2
sya00G53410
Synedra acus
4.9e-166
587.4
1480
32.2
ptri222140
Phaeodactylum tricornutum
6.0e-156
553.9
1439
30.7
fso16460
Fistulifera solaris
2.7e-140
501.9
1408
30.7
fso126020
Fistulifera solaris
6.0e-140
500.7
1441
30.9
Naga_100034g14
Nannochloropsis gaditana
1.3e-78
297.0
985
28.4
Ec-27_003040
Ectocarpus siliculosus
9.5e-69
264.2
380
44.2
AT4G34100
Arabidopsis thaliana
2.0e-26
123.6
441
27.7
Pp3c9_10370
Physcomitrella patens
9.9e-26
121.3
422
25.8
Pp3c9_10380
Physcomitrella patens
9.9e-26
121.3
422
25.8
Pp3c15_7960
Physcomitrella patens
2.2e-25
120.2
439
26.0
Pp3c15_8020
Physcomitrella patens
4.8e-20
102.4
439
25.5
Pp3c1_24550
Physcomitrella patens
6.2e-20
102.1
469
25.6
FBgn0035333
Drosophila melanogaster
7.9e-15
85.1
91
47.3
Naga_100546g1
Nannochloropsis gaditana
1.8e-14
84.0
92
47.8
ENSG00000145495
Homo sapiens
2.3e-14
83.6
80
45.0
gsu14010
Galdieria sulphuraria
3.0e-14
83.2
66
51.5
gsu14030
Galdieria sulphuraria
3.0e-14
83.2
66
51.5
CM20G05480
Cyanidioschyzon merolae
1.9e-13
80.5
72
48.6
ccr169360
Chondrus crispus
5.6e-13
79.0
882
21.3
AT4G32670
Arabidopsis thaliana
3.1e-11
73.2
79
40.5
SPBC14F5.07
Schizosaccharomyces pombe
3.1e-11
73.2
67
46.3
YIL030C
Saccharomyces cerevisiae strain S288C
6.9e-11
72.0
74
41.9
WBGene00018847
Caenorhabditis elegans
6.4e-09
65.5
357
22.1
Ec-03_004330
Ectocarpus siliculosus
1.1e-08
64.7
112
35.7
ENSG00000183654
Homo sapiens
6.7e-06
55.5
52
46.2
WBGene00007643
Caenorhabditis elegans
8.7e-06
55.1
45
48.9
ENSG00000139266
Homo sapiens
8.7e-06
55.1
53
43.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing