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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G149170
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G149170
Cyclotella cryptica
0.0e+00
1291.9
634
100.0
tps207170
Thalassiosira pseudonana
6.5e-160
565.8
658
50.2
sya00G100240
Synedra acus
2.2e-46
188.7
272
40.4
PSNMU-V1.4_AUG-EV-PASAV3_0097480
Pseudo-nitzschia multistriata
1.4e-45
186.0
264
37.9
Sro998_g229540
Seminavis robusta
2.0e-44
182.2
345
33.9
ps00G142770
Pseudo-nitzschia multiseries
3.5e-44
181.4
270
39.3
gene4093
Fragilariopsis cylindrus
1.1e-42
176.4
263
38.4
gene10628
Fragilariopsis cylindrus
4.2e-42
174.5
263
37.6
fso84200
Fistulifera solaris
2.8e-41
171.8
272
38.6
fso169850
Fistulifera solaris
4.0e-40
167.9
262
38.2
ptri50250
Phaeodactylum tricornutum
4.4e-39
164.5
265
34.7
Sro1334_g263770
Seminavis robusta
3.7e-38
161.4
278
34.9
CC00G179510
Cyclotella cryptica
1.5e-34
149.4
560
25.0
tps57970
Thalassiosira pseudonana
2.8e-33
145.2
429
26.3
Sro63_g035920
Seminavis robusta
9.2e-29
130.2
268
32.8
CC00G01040
Cyclotella cryptica
6.0e-28
127.5
260
29.6
tps110800
Thalassiosira pseudonana
7.8e-28
127.1
251
30.3
fso147910
Fistulifera solaris
1.1e-24
116.7
276
30.8
fso95330
Fistulifera solaris
4.4e-23
111.3
276
28.6
Sro858_g211810
Seminavis robusta
1.6e-20
102.8
254
26.8
Sro1106_g241970
Seminavis robusta
5.1e-19
97.8
252
31.7
pte405900
Paramecium tetraurelia
1.9e-18
95.9
264
29.2
sya00G144440
Synedra acus
2.1e-17
92.4
251
26.7
ptri114100
Phaeodactylum tricornutum
6.2e-17
90.9
272
27.6
sya00G61900
Synedra acus
1.1e-16
90.1
251
26.3
Ec-08_004990
Ectocarpus siliculosus
2.3e-16
89.0
232
26.7
tho216140
Thalassiosira oceanica
7.5e-15
84.0
417
22.3
PSNMU-V1.4_AUG-EV-PASAV3_0006050
Pseudo-nitzschia multistriata
2.3e-11
72.4
259
25.5
ps00G64300
Pseudo-nitzschia multiseries
5.1e-11
71.2
293
23.9
tps169650
Thalassiosira pseudonana
1.9e-10
69.3
247
25.9
pte140010
Paramecium tetraurelia
8.1e-09
63.9
177
23.7
Pp3c16_7090
Physcomitrella patens
1.8e-08
62.8
213
26.3
AT5G39590
Arabidopsis thaliana
1.3e-06
56.6
166
28.9
Pp3c5_11350
Physcomitrella patens
1.7e-06
56.2
174
25.9
pte751420
Paramecium tetraurelia
4.9e-06
54.7
154
27.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (5 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing