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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G13560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G13560
Cyclotella cryptica
1.8e-175
616.7
357
100.0
tps21230
Thalassiosira pseudonana
4.7e-139
495.7
340
83.8
tho03160
Thalassiosira oceanica
1.3e-117
424.5
311
79.7
Ec-16_001710
Ectocarpus siliculosus
1.6e-99
364.4
355
64.2
emh383700
Emiliania huxleyi
1.0e-85
318.5
351
56.1
emh66620
Emiliania huxleyi
1.0e-85
318.5
351
56.1
AA0051G00360
Aureococcus anophagefferens
7.3e-84
312.4
356
46.9
sya00G202300
Synedra acus
1.3e-83
311.6
358
58.1
AA0039G00160
Aureococcus anophagefferens
2.4e-82
307.4
351
47.3
fso195740
Fistulifera solaris
1.5e-76
288.1
365
51.0
fso128230
Fistulifera solaris
2.5e-76
287.3
365
50.7
ENSG00000078369
Homo sapiens
6.9e-74
279.3
349
56.2
Sro795_g203560
Seminavis robusta
9.0e-74
278.9
368
47.8
ENSG00000114450
Homo sapiens
3.4e-73
276.9
301
62.5
ENSG00000111664
Homo sapiens
6.5e-72
272.7
301
62.5
AT4G34460
Arabidopsis thaliana
1.0e-64
248.8
366
39.1
ENSG00000172354
Homo sapiens
3.8e-64
246.9
349
51.9
Naga_100002g133
Nannochloropsis gaditana
9.3e-63
242.3
283
62.5
FBgn0001105
Drosophila melanogaster
1.2e-62
241.9
347
52.2
ENSG00000069966
Homo sapiens
1.6e-62
241.5
348
49.4
ptri88800
Phaeodactylum tricornutum
3.5e-62
240.4
373
45.6
gene2763
Fragilariopsis cylindrus
2.2e-59
231.1
385
35.1
gene3334
Fragilariopsis cylindrus
2.8e-59
230.7
384
35.2
WBGene00001679
Caenorhabditis elegans
3.1e-58
227.3
349
50.1
Pp3c2_6210
Physcomitrella patens
1.3e-56
221.9
375
41.9
ps00G159050
Pseudo-nitzschia multiseries
2.8e-51
204.1
386
41.2
FBgn0030011
Drosophila melanogaster
6.3e-51
203.0
346
45.7
PSNMU-V1.4_AUG-EV-PASAV3_0073610
Pseudo-nitzschia multistriata
1.7e-48
194.9
372
34.1
WBGene00001680
Caenorhabditis elegans
7.9e-46
186.0
359
40.7
SPBC32H8.07
Schizosaccharomyces pombe
2.3e-45
184.5
299
48.5
FBgn0004623
Drosophila melanogaster
1.1e-42
175.6
351
42.2
YOR212W
Saccharomyces cerevisiae strain S288C
1.9e-39
164.9
394
29.4
Pp3c1_35990
Physcomitrella patens
8.5e-32
139.4
152
47.4
emh211780
Emiliania huxleyi
6.1e-30
133.3
317
25.6
emh167290
Emiliania huxleyi
8.0e-30
132.9
317
25.9
AA0002G06910
Aureococcus anophagefferens
3.0e-21
104.4
276
28.6
fso95120
Fistulifera solaris
4.6e-09
63.9
321
21.8
ccr87860
Chondrus crispus
5.9e-09
63.5
155
27.1
tho63360
Thalassiosira oceanica
3.9e-08
60.8
37
81.1
ENSG00000105325
Homo sapiens
5.0e-08
60.5
180
27.8
fso80290
Fistulifera solaris
6.6e-08
60.1
321
21.2
Pp3c3_16700
Physcomitrella patens
1.9e-07
58.5
141
27.0
tps65250
Thalassiosira pseudonana
5.6e-07
57.0
160
26.9
Pp3c7_9990
Physcomitrella patens
7.3e-07
56.6
200
22.5
Pp3c5_26150
Physcomitrella patens
8.0e-06
53.1
138
22.5
ptri93890
Phaeodactylum tricornutum
8.0e-06
53.1
104
33.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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