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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G134610
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G134610
Cyclotella cryptica
2.8e-205
715.7
348
100.0
tps224730
Thalassiosira pseudonana
2.5e-153
543.1
351
75.2
tho88780
Thalassiosira oceanica
2.3e-138
493.4
349
68.2
sya00G102750
Synedra acus
4.0e-127
456.1
347
63.7
PSNMU-V1.4_AUG-EV-PASAV3_0116580
Pseudo-nitzschia multistriata
2.1e-123
443.7
348
60.6
ptri152360
Phaeodactylum tricornutum
1.1e-121
438.0
347
62.5
Sro937_g222220
Seminavis robusta
4.3e-121
436.0
347
60.5
fso93470
Fistulifera solaris
4.4e-118
426.0
347
58.2
fso158920
Fistulifera solaris
2.7e-115
416.8
347
57.9
Cre17.g734900
Chlamydomonas reinhardtii
2.3e-82
307.4
374
42.5
AA0012G02510
Aureococcus anophagefferens
8.8e-82
305.4
353
46.7
Ec-24_001420
Ectocarpus siliculosus
1.1e-79
298.5
358
43.9
ccr21440
Chondrus crispus
1.8e-79
297.7
353
45.0
emh596280
Emiliania huxleyi
1.4e-76
288.1
369
44.4
Naga_100859g1
Nannochloropsis gaditana
6.1e-75
282.7
368
41.6
gene10083
Fragilariopsis cylindrus
2.8e-72
273.9
216
60.2
gene9478
Fragilariopsis cylindrus
5.5e-52
206.5
216
49.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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