Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G115820
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G115820
Cyclotella cryptica
1.3e-299
1029.6
510
100.0
tps145870
Thalassiosira pseudonana
1.0e-256
887.1
505
85.0
fso58830
Fistulifera solaris
8.5e-219
761.1
505
75.0
ptri204820
Phaeodactylum tricornutum
4.2e-218
758.8
498
74.9
fso144760
Fistulifera solaris
1.0e-216
754.2
505
74.5
ps00G163920
Pseudo-nitzschia multiseries
2.3e-216
753.1
498
74.9
Sro361_g126590
Seminavis robusta
9.8e-215
747.7
497
74.6
PSNMU-V1.4_AUG-EV-PASAV3_0002360
Pseudo-nitzschia multistriata
1.3e-214
747.3
496
74.6
gene17834
Fragilariopsis cylindrus
7.2e-210
731.5
493
72.6
sya00G231210
Synedra acus
1.2e-199
697.6
486
71.2
Ec-27_001900
Ectocarpus siliculosus
1.1e-186
654.4
497
64.6
AA0001G06270
Aureococcus anophagefferens
3.3e-170
599.7
505
60.0
Pp3c2_16770
Physcomitrella patens
3.9e-155
549.7
480
56.5
Cre09.g389430
Chlamydomonas reinhardtii
1.0e-150
535.0
501
54.5
AT4G39280
Arabidopsis thaliana
1.9e-149
530.8
494
54.0
ENSG00000179115
Homo sapiens
1.5e-146
521.2
484
53.7
FBgn0030007
Drosophila melanogaster
2.8e-145
516.9
474
55.9
WBGene00001497
Caenorhabditis elegans
1.7e-142
507.7
472
54.0
ccr148280
Chondrus crispus
2.0e-135
484.2
507
50.1
emh742140
Emiliania huxleyi
7.2e-133
475.7
520
48.8
emh145210
Emiliania huxleyi
7.2e-133
475.7
520
48.8
YFL022C
Saccharomyces cerevisiae strain S288C
7.2e-125
449.1
474
47.0
SPAC3G9.06
Schizosaccharomyces pombe
1.6e-124
448.0
461
50.8
tho155060
Thalassiosira oceanica
2.7e-124
447.2
237
87.3
pte785500
Paramecium tetraurelia
5.7e-122
439.5
523
46.7
pte622120
Paramecium tetraurelia
1.3e-121
438.3
494
47.4
pte720000
Paramecium tetraurelia
6.3e-121
436.0
523
46.3
CM09G02950
Cyanidioschyzon merolae
1.1e-117
425.2
521
46.6
gsu112830
Galdieria sulphuraria
2.3e-91
337.8
387
46.3
Naga_101153g1
Nannochloropsis gaditana
1.3e-78
295.4
162
82.7
tho45520
Thalassiosira oceanica
1.6e-68
261.9
220
63.6
sya00G184200
Synedra acus
9.0e-27
123.2
272
30.9
Ec-15_003330
Ectocarpus siliculosus
4.6e-23
110.9
269
30.1
sya00G258880
Synedra acus
7.9e-23
110.2
286
28.7
ptri229970
Phaeodactylum tricornutum
2.5e-21
105.1
266
28.6
Sro174_g076640
Seminavis robusta
2.5e-21
105.1
279
29.0
ccr112980
Chondrus crispus
9.7e-21
103.2
266
28.2
fso53830
Fistulifera solaris
3.7e-20
101.3
263
28.1
fso129470
Fistulifera solaris
6.3e-20
100.5
263
28.1
Naga_101129g1
Nannochloropsis gaditana
7.7e-18
93.6
165
35.2
sya00G259610
Synedra acus
1.7e-12
75.9
245
26.1
fso157450
Fistulifera solaris
2.8e-12
75.1
264
26.1
ptri121100
Phaeodactylum tricornutum
4.8e-12
74.3
267
25.8
tho55100
Thalassiosira oceanica
1.5e-10
69.3
240
26.2
AT3G58140
Arabidopsis thaliana
2.0e-10
68.9
169
29.6
fso172170
Fistulifera solaris
2.0e-10
68.9
264
25.0
CC00G120080
Cyclotella cryptica
5.9e-10
67.4
177
29.9
emh464180
Emiliania huxleyi
7.7e-10
67.0
240
26.7
PSNMU-V1.4_AUG-EV-PASAV3_0057390
Pseudo-nitzschia multistriata
2.9e-09
65.1
178
29.2
tho277000
Thalassiosira oceanica
3.2e-08
61.6
279
22.9
ps00G86570
Pseudo-nitzschia multiseries
9.4e-08
60.1
279
24.0
ccr92820
Chondrus crispus
1.6e-07
59.3
166
27.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (4 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing