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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G109430
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G109430
Cyclotella cryptica
4.1e-232
805.1
403
100.0
CC00G20910
Cyclotella cryptica
7.9e-151
535.0
382
72.5
CC00G16360
Cyclotella cryptica
1.6e-47
191.8
168
54.2
sya00G238580
Synedra acus
4.8e-47
190.3
401
33.9
CC00G170920
Cyclotella cryptica
6.9e-46
186.4
178
51.1
sya00G191580
Synedra acus
3.2e-43
177.6
411
32.1
sya00G62270
Synedra acus
7.9e-42
172.9
401
30.4
sya00G212950
Synedra acus
5.1e-41
170.2
402
31.1
sya00G103790
Synedra acus
4.3e-40
167.2
414
30.9
CC00G55650
Cyclotella cryptica
4.8e-39
163.7
129
58.9
CC00G36700
Cyclotella cryptica
4.2e-35
150.6
122
56.6
CC00G67460
Cyclotella cryptica
1.2e-34
149.1
129
53.5
CC00G170910
Cyclotella cryptica
3.5e-34
147.5
121
57.0
sya00G181920
Synedra acus
3.9e-33
144.1
387
29.2
sya00G79880
Synedra acus
7.4e-32
139.8
199
39.7
sya00G245830
Synedra acus
4.0e-30
134.0
377
30.0
sya00G257750
Synedra acus
4.0e-30
134.0
382
28.0
sya00G59780
Synedra acus
6.9e-30
133.3
351
29.9
sya00G05190
Synedra acus
2.9e-28
127.9
356
30.3
sya00G246540
Synedra acus
4.2e-27
124.0
146
43.8
sya00G221970
Synedra acus
9.3e-27
122.9
190
38.4
sya00G93160
Synedra acus
1.2e-26
122.5
202
37.6
sya00G93190
Synedra acus
1.2e-26
122.5
202
37.6
sya00G93260
Synedra acus
1.2e-26
122.5
202
37.6
Sro882_g215390
Seminavis robusta
3.0e-25
117.9
305
33.4
sya00G03650
Synedra acus
3.3e-24
114.4
127
44.9
sya00G197450
Synedra acus
2.4e-22
108.2
377
26.8
sya00G207820
Synedra acus
2.4e-22
108.2
131
38.9
PSNMU-V1.4_AUG-EV-PASAV3_0011870
Pseudo-nitzschia multistriata
5.3e-22
107.1
145
38.6
PSNMU-V1.4_AUG-EV-PASAV3_0006560
Pseudo-nitzschia multistriata
6.9e-22
106.7
143
38.5
sya00G57360
Synedra acus
6.9e-22
106.7
120
44.2
sya00G186020
Synedra acus
1.2e-21
105.9
222
33.3
sya00G210010
Synedra acus
4.5e-21
104.0
131
41.2
PSNMU-V1.4_AUG-EV-PASAV3_0001900
Pseudo-nitzschia multistriata
5.9e-21
103.6
143
38.5
sya00G62110
Synedra acus
5.0e-20
100.5
305
28.5
sya00G03860
Synedra acus
3.2e-19
97.8
122
43.4
sya00G236900
Synedra acus
3.2e-19
97.8
122
43.4
sya00G59300
Synedra acus
4.2e-19
97.4
196
34.2
sya00G65920
Synedra acus
4.2e-19
97.4
155
36.8
sya00G158680
Synedra acus
4.2e-19
97.4
166
36.1
sya00G51030
Synedra acus
5.5e-19
97.1
340
26.8
sya00G102460
Synedra acus
1.2e-18
95.9
122
41.0
sya00G99530
Synedra acus
3.5e-18
94.4
338
26.6
sya00G253490
Synedra acus
1.8e-17
92.0
107
43.0
sya00G180670
Synedra acus
1.5e-16
89.0
132
40.9
sya00G236000
Synedra acus
1.5e-16
89.0
132
37.9
sya00G165500
Synedra acus
1.9e-16
88.6
96
43.8
sya00G95810
Synedra acus
5.7e-16
87.0
131
37.4
sya00G165470
Synedra acus
5.7e-16
87.0
133
37.6
sya00G59140
Synedra acus
7.4e-16
86.7
122
38.5
sya00G213310
Synedra acus
7.4e-16
86.7
115
40.9
sya00G140740
Synedra acus
9.7e-16
86.3
121
40.5
sya00G225640
Synedra acus
1.6e-15
85.5
153
35.9
sya00G132550
Synedra acus
2.8e-15
84.7
308
26.9
Sro4424_g353970
Seminavis robusta
6.3e-15
83.6
295
26.8
fso163300
Fistulifera solaris
2.4e-14
81.6
448
24.6
sya00G122890
Synedra acus
2.4e-14
81.6
116
40.5
fso200820
Fistulifera solaris
5.3e-14
80.5
448
25.9
sya00G271160
Synedra acus
1.2e-13
79.3
126
37.3
sya00G125370
Synedra acus
1.5e-13
79.0
132
33.3
sya00G265780
Synedra acus
1.5e-13
79.0
321
25.5
sya00G49780
Synedra acus
2.0e-13
78.6
107
38.3
sya00G156700
Synedra acus
4.5e-13
77.4
86
43.0
sya00G185780
Synedra acus
7.7e-13
76.6
118
36.4
sya00G180660
Synedra acus
1.3e-12
75.9
91
39.6
fso79470
Fistulifera solaris
2.2e-12
75.1
450
25.6
sya00G146680
Synedra acus
2.9e-12
74.7
90
44.4
sya00G145620
Synedra acus
6.5e-12
73.6
141
34.8
sya00G166110
Synedra acus
1.4e-11
72.4
108
36.1
sya00G225580
Synedra acus
3.2e-11
71.2
105
38.1
sya00G214840
Synedra acus
4.2e-11
70.9
80
42.5
sya00G248190
Synedra acus
4.2e-11
70.9
97
44.3
sya00G151540
Synedra acus
9.4e-11
69.7
90
36.7
sya00G92690
Synedra acus
1.2e-10
69.3
76
46.1
sya00G03630
Synedra acus
1.6e-10
68.9
92
41.3
sya00G79870
Synedra acus
1.6e-10
68.9
91
42.9
sya00G138990
Synedra acus
6.1e-10
67.0
97
39.2
sya00G03850
Synedra acus
1.8e-09
65.5
123
37.4
sya00G89340
Synedra acus
2.3e-09
65.1
86
40.7
sya00G146660
Synedra acus
2.3e-09
65.1
124
33.1
sya00G161340
Synedra acus
3.9e-09
64.3
130
34.6
sya00G233930
Synedra acus
1.5e-08
62.4
85
41.2
ps00G149740
Pseudo-nitzschia multiseries
5.7e-08
60.5
116
33.6
sya00G75970
Synedra acus
7.4e-08
60.1
106
34.0
sya00G225180
Synedra acus
9.7e-08
59.7
83
42.2
ptri214430
Phaeodactylum tricornutum
1.3e-07
59.3
127
31.5
sya00G59160
Synedra acus
1.3e-07
59.3
97
41.2
sya00G191050
Synedra acus
1.7e-07
58.9
195
27.2
sya00G26100
Synedra acus
2.8e-07
58.2
62
38.7
fso200810
Fistulifera solaris
4.8e-07
57.4
122
32.0
sya00G109590
Synedra acus
4.8e-07
57.4
142
31.7
sya00G135050
Synedra acus
4.8e-07
57.4
128
32.0
sya00G163720
Synedra acus
4.8e-07
57.4
230
25.7
sya00G35470
Synedra acus
1.1e-06
56.2
139
29.5
sya00G14210
Synedra acus
1.4e-06
55.8
273
25.6
sya00G76460
Synedra acus
1.4e-06
55.8
263
24.7
sya00G103640
Synedra acus
3.1e-06
54.7
95
33.7
sya00G00210
Synedra acus
6.9e-06
53.5
139
30.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (8 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (79 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing