Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G05190
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G05190
Cyclotella cryptica
0.0e+00
1872.1
1027
100.0
CC00G68530
Cyclotella cryptica
1.1e-196
688.7
901
46.2
CC00G193290
Cyclotella cryptica
1.9e-177
624.8
927
42.8
CC00G67300
Cyclotella cryptica
1.6e-168
595.1
958
39.2
CC00G139370
Cyclotella cryptica
1.5e-158
562.0
991
38.8
CC00G210680
Cyclotella cryptica
4.5e-150
533.9
633
49.0
CC00G42660
Cyclotella cryptica
5.8e-142
506.9
627
48.2
CC00G42860
Cyclotella cryptica
7.7e-126
453.4
299
76.3
CC00G59300
Cyclotella cryptica
1.4e-103
379.4
202
87.1
CC00G92420
Cyclotella cryptica
2.0e-78
295.8
707
32.1
CC00G59290
Cyclotella cryptica
1.0e-77
293.5
764
29.7
CC00G145190
Cyclotella cryptica
4.9e-72
274.6
554
32.3
CC00G159220
Cyclotella cryptica
2.6e-49
199.1
130
70.0
CC00G210670
Cyclotella cryptica
4.9e-48
194.9
130
73.1
CC00G38470
Cyclotella cryptica
6.4e-48
194.5
130
70.8
CC00G176220
Cyclotella cryptica
4.2e-47
191.8
354
33.6
CC00G118720
Cyclotella cryptica
6.6e-45
184.5
116
73.3
CC00G92410
Cyclotella cryptica
1.4e-42
176.8
118
69.5
CC00G210690
Cyclotella cryptica
1.9e-36
156.4
258
38.0
CC00G153750
Cyclotella cryptica
4.8e-35
151.8
218
40.8
CC00G56090
Cyclotella cryptica
5.3e-34
148.3
84
81.0
CC00G177010
Cyclotella cryptica
7.4e-28
127.9
66
83.3
CC00G67130
Cyclotella cryptica
6.9e-26
121.3
261
39.5
CC00G104520
Cyclotella cryptica
2.0e-25
119.8
113
54.9
tho139880
Thalassiosira oceanica
2.2e-19
99.8
79
62.0
tho158000
Thalassiosira oceanica
2.2e-19
99.8
79
62.0
tho01120
Thalassiosira oceanica
8.2e-19
97.8
62
66.1
CC00G47840
Cyclotella cryptica
3.1e-18
95.9
130
42.3
CC00G75400
Cyclotella cryptica
3.1e-18
95.9
130
42.3
tho26600
Thalassiosira oceanica
5.3e-18
95.1
61
65.6
tho418560
Thalassiosira oceanica
1.2e-17
94.0
69
65.2
tho59300
Thalassiosira oceanica
4.5e-17
92.0
69
62.3
tho163240
Thalassiosira oceanica
2.2e-16
89.7
63
60.3
tho611060
Thalassiosira oceanica
2.2e-16
89.7
63
60.3
CC00G62800
Cyclotella cryptica
1.2e-14
84.0
43
86.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (8 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (27 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing